RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 HIGD1AQ9Y241 93 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 WDR83OSQ9Y284 106 aa9.6□□□□□ -0.87
SMAD3-213ENST00000560175 RYR2Q92736 4967 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 S100A11P31949 105 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 SULT1A1P50225 295 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 DEFA1P59665 94 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 DEFA3P59666 94 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 RAP2BP61225 183 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 PRR20EP86478 221 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 PRR20CP86479 221 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 PRR20DP86480 221 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 PRR20BP86481 221 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 PRR20AP86496 221 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 ZNF546Q86UE3 836 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 Q8NAQ8 132 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 SCRT1Q9BWW7 348 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 ARL6Q9H0F7 186 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 X6R8D5 127 aa9.59□□□□□ -0.87
SMAD3-213ENST00000560175 A0A087X0K7 114 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 TRAV8-2A0A0B4J237 113 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 IGSF23A1L1A6 192 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 GOSR2O14653 212 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 CST7O76096 145 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 RPL7P18124 248 aaKnown RBP9.58□□□□□ -0.88
SMAD3-213ENST00000560175 BCAP31P51572 246 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 CAV2P51636 162 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 H2BFSP57053 126 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
SMAD3-213ENST00000560175 CYCSP99999 105 aaKnown RBP9.58□□□□□ -0.88
SMAD3-213ENST00000560175 ATP6V1FQ16864 119 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 S100A7AQ86SG5 101 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 C20orf173Q96LM9 149 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 C1QTNF4Q9BXJ3 329 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 ARV1Q9H2C2 271 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 SLC25A22Q9H936 323 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 DOK5Q9P104 306 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 RNF24Q9Y225 148 aa9.58□□□□□ -0.88
SMAD3-213ENST00000560175 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-213ENST00000560175 A0A0J9YX75 114 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 H0YIZ8 118 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 SIX6O95475 246 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 MIFP14174 115 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 RPL29P47914 159 aaKnown RBP9.57□□□□□ -0.88
SMAD3-213ENST00000560175 DEFB1P60022 68 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 LINC00052Q96N35 136 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 UHRF2Q96PU4 802 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 RPRMQ9NS64 109 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 UQCC1Q9NVA1 299 aa9.57□□□□□ -0.88
SMAD3-213ENST00000560175 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 OR5G3P0C626 314 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 RBMY1A1P0DJD3 496 aaKnown RBP9.56□□□□□ -0.88
SMAD3-213ENST00000560175 RBMY1CP0DJD4 496 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 CAMLGP49069 296 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 S100A10P60903 97 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 RAB31Q13636 194 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 RBMY1FQ15415 496 aaKnown RBP9.56□□□□□ -0.88
SMAD3-213ENST00000560175 CEMP1Q6PRD7 247 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-213ENST00000560175 ZNF705AQ6ZN79 300 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-213ENST00000560175 NEU1Q99519 415 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 RNF126Q9BV68 326 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 HRH4Q9H3N8 390 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 DNAJC4Q9NNZ3 241 aa9.56□□□□□ -0.88
SMAD3-213ENST00000560175 NUPR2A6NF83 97 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-213ENST00000560175 E5RGE8 158 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 RLN2P04090 185 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-213ENST00000560175 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-213ENST00000560175 HBG1P69891 147 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 HBG2P69892 147 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 NHLH2Q02577 135 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 OPCMLQ14982 345 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 AMTNQ6UX39 209 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 LINC00305Q7Z4B0 112 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 STX12Q86Y82 276 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 CLEC5AQ9NY25 188 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 OR5AC2Q9NZP5 309 aa9.55□□□□□ -0.88
SMAD3-213ENST00000560175 IGHV4-28A0A0C4DH34 117 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 F6UB75 175 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 MPDU1O75352 247 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 CXCL2P19875 107 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 PSG9Q00887 426 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 MORN5Q5VZ52 161 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 MIC13Q5XKP0 118 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 EBLN2Q6P2I7 272 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 Q6ZRG5 221 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 PPP1R1CQ8WVI7 109 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 SLC25A31Q9H0C2 315 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 XCL2Q9UBD3 114 aa9.54□□□□□ -0.88
SMAD3-213ENST00000560175 HYDINQ4G0P3 5121 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 IGLC2P0DOY2 106 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 CXCL3P19876 107 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 OR1L4Q8NGR5 311 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms