RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 OXA1LQ15070 435 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 CNPY1Q3B7I2 92 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 FAM222AQ5U5X8 452 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 CYP2G1PQ6ZSU1 146 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 IGF2BP2-AS1Q96M15 143 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 HIGD1AQ9Y241 93 aa8.77□□□□□ -1.01
SPG11-219ENST00000559822 FNDC10F2Z333 226 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 H3BRN7 92 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 SSSCA1O60232 199 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 HYPMO75409 117 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 ADAP1O75689 374 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 OR4E1P0C645 316 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 GATA2P23769 480 aaPredicted RBP8.76□□□□□ -1.01
SPG11-219ENST00000559822 B2MP61769 119 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 DLK1P80370 383 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 FGL1Q08830 312 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 C4orf46Q504U0 113 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 SMIM8Q96KF7 97 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 C20orf173Q96LM9 149 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 SHANK2-AS3Q9BTD1 123 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 SCRT1Q9BWW7 348 aa8.76□□□□□ -1.01
SPG11-219ENST00000559822 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
SPG11-219ENST00000559822 RBM38Q9H0Z9 239 aaKnown RBP8.76□□□□□ -1.01
SPG11-219ENST00000559822 VPS13DQ5THJ4 4388 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 INSP01308 110 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 LINC00869P0C866 280 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 CNN1P51911 297 aaKnown RBP8.75□□□□□ -1.01
SPG11-219ENST00000559822 PLP1P60201 277 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 DAD1P61803 113 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 TMEM182Q6ZP80 229 aaPredicted RBP8.75□□□□□ -1.01
SPG11-219ENST00000559822 C1orf158Q8N1D5 194 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 OR10P1Q8NGE3 313 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 NPVFQ9HCQ7 196 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 MGAT4CQ9UBM8 478 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 YTHDF2Q9Y5A9 579 aaKnown RBP8.75□□□□□ -1.01
SPG11-219ENST00000559822 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
SPG11-219ENST00000559822 OR5G3P0C626 314 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 HTN3P15516 51 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 TAS2R30P59541 319 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 BAK1Q16611 211 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 IAH1Q2TAA2 248 aaPredicted RBP8.74□□□□□ -1.01
SPG11-219ENST00000559822 PXDC1Q5TGL8 231 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 TEPPQ6URK8 271 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 AMTNQ6UX39 209 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 ZNF738Q8NE65 137 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 LRRC20Q8TCA0 184 aa8.74□□□□□ -1.01
SPG11-219ENST00000559822 PMS2P5A8MQ11 134 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 LYRM9A8MSI8 78 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 K7EPK0 472 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 TSC22D2O75157 780 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 SCGB1D2O95969 90 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 METTL15P1P0C7V9 234 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 RRAS2P62070 204 aaPredicted RBP8.73□□□□□ -1.01
SPG11-219ENST00000559822 SPINK13Q1W4C9 94 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 TMEM14EPQ6UXP3 125 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 ZNF546Q86UE3 836 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 RNF182Q8N6D2 247 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 OR11H7Q8NGC8 314 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 C17orf77Q96MU5 243 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 PPP1R14DQ9NXH3 145 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 FLVCR2Q9UPI3 526 aa8.73□□□□□ -1.01
SPG11-219ENST00000559822 A0A087X0K7 114 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 TRAV8-2A0A0B4J237 113 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 BOLA2-SMG1P6H3BVE0 249 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 M0R2Z0 102 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 GOSR2O14653 212 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 CXCL2P19875 107 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 ANXA7P20073 488 aaKnown RBP8.72□□□□□ -1.01
SPG11-219ENST00000559822 TSPOP30536 169 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 RNF212Q495C1 297 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 TMEM256Q8N2U0 113 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 ZBTB8BQ8NAP8 495 aaPredicted RBP8.72□□□□□ -1.01
SPG11-219ENST00000559822 MITD1Q8WV92 249 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 GGACTQ9BVM4 153 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 ARL6Q9H0F7 186 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 ARV1Q9H2C2 271 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 GSKIPQ9P0R6 139 aa8.72□□□□□ -1.01
SPG11-219ENST00000559822 CXCL3P19876 107 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 RHOBP62745 196 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
SPG11-219ENST00000559822 ZNF846Q147U1 533 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 PSG3Q16557 428 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 IGFL4Q6B9Z1 124 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 LCN15Q6UWW0 184 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 OR8A1Q8NGG7 326 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 UHRF2Q96PU4 802 aa8.71□□□□□ -1.02
SPG11-219ENST00000559822 PRSS29PA6NIE9 313 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 L7N2F9 121 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 M0R2N4 97 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 CRXO43186 299 aaPredicted RBP8.7□□□□□ -1.02
SPG11-219ENST00000559822 CCNKO75909 580 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 IL7P13232 177 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 BTCP35070 178 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 VAMP2P63027 116 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms