RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 OR51M1Q9H341 326 aa13.25□□□□□ -0.29
CHRNA3-206ENST00000559658 NUDT19A8MXV4 375 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 H3BQ15 152 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 MRPS12O15235 138 aaKnown RBP13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 PRB4P10163 310 aaPredicted RBP13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 SLURP1P55000 103 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 TM4SF20Q53R12 229 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 C4orf3Q8WVX3 66 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 C17orf77Q96MU5 243 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 ATRQ13535 2644 aa13.24□□□□□ -0.29
CHRNA3-206ENST00000559658 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 PSMB3P49720 205 aa13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 PPT1P50897 306 aa13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 CD81P60033 236 aa13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 RPEL1Q2QD12 228 aa13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 ZNF586Q9NXT0 402 aa13.23□□□□□ -0.29
CHRNA3-206ENST00000559658 FAM74A7A6NL05 159 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 GGTLC3B5MD39 225 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 BUB3O43684 328 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 CRYBB3P26998 211 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 SYNJ2BPP57105 145 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 OR11H1Q8NG94 326 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 SUN5Q8TC36 379 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 SMAD5-AS1Q9Y6J3 95 aa13.22□□□□□ -0.29
CHRNA3-206ENST00000559658 FBN1P35555 2871 aaKnown RBP13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 ADARB2-AS1A8MUL3 147 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 SLC17A3O00476 420 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 SFTA3P0C7M3 94 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 MEF2BQ02080 365 aaPredicted RBP13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 UQCC3Q6UW78 93 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 METTL26Q96S19 204 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 MANBALQ9NQG1 85 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 U3KQE9 123 aa13.21□□□□□ -0.29
CHRNA3-206ENST00000559658 SRP19P09132 144 aaKnown RBP13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 IGLC2P0DOY2 106 aa13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 CEBPGP53567 150 aa13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 PMS2P11Q13670 270 aa13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 RAX2Q96IS3 184 aa13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 VAX2Q9UIW0 290 aa13.21□□□□□ -0.3
CHRNA3-206ENST00000559658 WNK1Q9H4A3 2382 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 TMEM218A2RU14 115 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 C11orf94C9JXX5 98 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 IFNA1P01562 189 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 TMEM167BQ9NRX6 74 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 TMEM14CQ9P0S9 112 aa13.2□□□□□ -0.3
CHRNA3-206ENST00000559658 TMEM213A2RRL7 107 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 NDUFB4O95168 129 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 NPPCP23582 126 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 PEA15Q15121 130 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 BPIFA4PQ86YQ2 179 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 OR8I2Q8N0Y5 310 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 OR4F4Q96R69 305 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
CHRNA3-206ENST00000559658 SCO2A0A1W2PP80 73 aa13.18□□□□□ -0.3
CHRNA3-206ENST00000559658 LINC01619G3V211 115 aa13.18□□□□□ -0.3
CHRNA3-206ENST00000559658 RANP62826 216 aaKnown RBP13.18□□□□□ -0.3
CHRNA3-206ENST00000559658 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
CHRNA3-206ENST00000559658 KLF5Q13887 457 aaPredicted RBP13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 FAM106AQ4KMX7 169 aa13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 VWFP04275 2813 aa13.17□□□□□ -0.3
CHRNA3-206ENST00000559658 TRBV19A0A075B6N1 114 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 IGHV7-4-1A0A0J9YVY3 117 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 ZP3P21754 424 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 KRTAP24-1Q3LI83 254 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 CCDC28AQ8IWP9 274 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 ELOVL1Q9BW60 279 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 MYCNOSP40205 109 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 GNG5P63218 68 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 REC114Q7Z4M0 266 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 OR4F17Q8NGA8 305 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 RHPN1-AS1Q9BWJ2 59 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 SLC35B3Q9H1N7 401 aa13.16□□□□□ -0.3
CHRNA3-206ENST00000559658 A8MWP6 167 aa13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 CHEK1O14757 476 aa13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 RPL7P18124 248 aaKnown RBP13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 FHL3Q13643 280 aa13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 C1QL4Q86Z23 238 aa13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 Q9H3A6 140 aa13.15□□□□□ -0.3
CHRNA3-206ENST00000559658 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
CHRNA3-206ENST00000559658 HLA-DMBP28068 263 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms