RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CXCL2P19875 107 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 GCSAMLQ5JQS6 135 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 MORN5Q5VZ52 161 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 DCANP1Q8TF63 244 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 NRN1Q9NPD7 142 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 C19orf73Q9NVV2 129 aa16.19■□□□□ 0.18
SNX1-206ENST00000559389 ODF3L2Q3SX64 289 aa16.18■□□□□ 0.18
SNX1-206ENST00000559389 FFAR4Q5NUL3 377 aa16.18■□□□□ 0.18
SNX1-206ENST00000559389 MRAPQ8TCY5 172 aa16.18■□□□□ 0.18
SNX1-206ENST00000559389 PSMG3Q9BT73 122 aaPredicted RBP16.18■□□□□ 0.18
SNX1-206ENST00000559389 RFNGQ9Y644 331 aa16.18■□□□□ 0.18
SNX1-206ENST00000559389 A0A0D9SG52 128 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 DNASE2O00115 360 aaPredicted RBP16.17■□□□□ 0.18
SNX1-206ENST00000559389 RPL7P18124 248 aaKnown RBP16.17■□□□□ 0.18
SNX1-206ENST00000559389 ATP6V0CP27449 155 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 GALR1P47211 349 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 WFDC3Q8IUB2 231 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 ARPC5LQ9BPX5 153 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 FAM110AQ9BQ89 295 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 WFDC10AQ9H1F0 79 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 CYTL1Q9NRR1 136 aa16.17■□□□□ 0.18
SNX1-206ENST00000559389 MRPS12O15235 138 aaKnown RBP16.16■□□□□ 0.18
SNX1-206ENST00000559389 FAM24BQ8N5W8 94 aa16.16■□□□□ 0.18
SNX1-206ENST00000559389 OR2G3Q8NGZ4 309 aa16.16■□□□□ 0.18
SNX1-206ENST00000559389 SMAD5-AS1Q9Y6J3 95 aa16.16■□□□□ 0.18
SNX1-206ENST00000559389 BCL2L11O43521 198 aa16.15■□□□□ 0.18
SNX1-206ENST00000559389 JTBO76095 146 aa16.15■□□□□ 0.18
SNX1-206ENST00000559389 HYLS1Q96M11 299 aa16.15■□□□□ 0.18
SNX1-206ENST00000559389 MRPL32Q9BYC8 188 aaKnown RBP16.15■□□□□ 0.18
SNX1-206ENST00000559389 SH3BGRL3Q9H299 93 aa16.15■□□□□ 0.18
SNX1-206ENST00000559389 MAP6D1Q9H9H5 199 aa16.15■□□□□ 0.18
SNX1-206ENST00000559389 UBQLN2Q9UHD9 624 aa16.15■□□□□ 0.18
SNX1-206ENST00000559389 SOCS3O14543 225 aa16.14■□□□□ 0.17
SNX1-206ENST00000559389 FAM78BQ5VT40 261 aa16.14■□□□□ 0.17
SNX1-206ENST00000559389 GNPNAT1Q96EK6 184 aaPredicted RBP16.14■□□□□ 0.17
SNX1-206ENST00000559389 C17orf77Q96MU5 243 aa16.14■□□□□ 0.17
SNX1-206ENST00000559389 SEPSECSQ9HD40 501 aaKnown RBP16.14■□□□□ 0.17
SNX1-206ENST00000559389 A0A087X0K7 114 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 TRAV5A0A0B4J249 113 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 OR11H12B2RN74 326 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 IGHV4-30-4P0DP06 118 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 MEOX2P50222 304 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 ZFP69Q49AA0 526 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 SPATA31B1PQ5VZV4 182 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 BPIFA4PQ86YQ2 179 aa16.13■□□□□ 0.17
SNX1-206ENST00000559389 DNAH3Q8TD57 4116 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 MEGF8Q7Z7M0 2845 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 KANTRA0A1W2PQU2 76 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 A8MZ25 164 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 ZNF688P0C7X2 276 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 ATF4P18848 351 aaPredicted RBP16.12■□□□□ 0.17
SNX1-206ENST00000559389 M6PRP20645 277 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 CMC4P56277 68 aaPredicted RBP16.12■□□□□ 0.17
SNX1-206ENST00000559389 ACOT6Q3I5F7 207 aaPredicted RBP16.12■□□□□ 0.17
SNX1-206ENST00000559389 SAMD13Q5VXD3 122 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 TMUB2Q71RG4 321 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 MIR17HGQ75NE6 70 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 DEFB125Q8N687 156 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 FUT9Q9Y231 359 aa16.12■□□□□ 0.17
SNX1-206ENST00000559389 IGLC2P0DOY2 106 aa16.11■□□□□ 0.17
SNX1-206ENST00000559389 RAB2AP61019 212 aa16.11■□□□□ 0.17
SNX1-206ENST00000559389 SERF2P84101 59 aa16.11■□□□□ 0.17
SNX1-206ENST00000559389 LGALSLQ3ZCW2 172 aaPredicted RBP16.11■□□□□ 0.17
SNX1-206ENST00000559389 FAM167A-AS1Q96KT0 104 aa16.11■□□□□ 0.17
SNX1-206ENST00000559389 SLC25A2Q9BXI2 301 aa16.11■□□□□ 0.17
SNX1-206ENST00000559389 PFDN1O60925 122 aa16.1■□□□□ 0.17
SNX1-206ENST00000559389 PSMB3P49720 205 aa16.1■□□□□ 0.17
SNX1-206ENST00000559389 DEFB131AP59861 70 aa16.1■□□□□ 0.17
SNX1-206ENST00000559389 DEFB121Q5J5C9 76 aa16.1■□□□□ 0.17
SNX1-206ENST00000559389 SRD5A3Q9H8P0 318 aa16.1■□□□□ 0.17
SNX1-206ENST00000559389 TMEM14CQ9P0S9 112 aa16.1■□□□□ 0.17
SNX1-206ENST00000559389 ISLRO14498 428 aa16.09■□□□□ 0.17
SNX1-206ENST00000559389 SNRPD3P62318 126 aaKnown RBP16.09■□□□□ 0.17
SNX1-206ENST00000559389 RHOBP62745 196 aa16.09■□□□□ 0.17
SNX1-206ENST00000559389 CITED4Q96RK1 184 aa16.09■□□□□ 0.17
SNX1-206ENST00000559389 ZNF471Q9BX82 626 aaPredicted RBP16.09■□□□□ 0.17
SNX1-206ENST00000559389 FRMD6-AS1P0C7T7 363 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 SPP1P10451 314 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 PSMG4Q5JS54 123 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 APRG1Q8IVJ8 170 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 C9orf62Q8N4C0 152 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 OR10G4Q8NGN3 311 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 OR10G9Q8NGN4 311 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 OR10G7Q8NGN6 311 aa16.08■□□□□ 0.16
SNX1-206ENST00000559389 H3BQ15 152 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 MBP02144 154 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 ID1P41134 155 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 ZNF124Q15973 351 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 FAM122CQ6P4D5 195 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 LCN15Q6UWW0 184 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 C16orf92Q96LL3 132 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 HRH4Q9H3N8 390 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 TUBA4BQ9H853 241 aa16.07■□□□□ 0.16
SNX1-206ENST00000559389 TRAV8-2A0A0B4J237 113 aa16.06■□□□□ 0.16
SNX1-206ENST00000559389 PYYP10082 97 aa16.06■□□□□ 0.16
SNX1-206ENST00000559389 EIF5AP63241 154 aaKnown RBP16.06■□□□□ 0.16
SNX1-206ENST00000559389 KHDC3LQ587J8 217 aa16.06■□□□□ 0.16
SNX1-206ENST00000559389 TMEM41BQ5BJD5 291 aa16.06■□□□□ 0.16
SNX1-206ENST00000559389 LINC00322Q6ZN03 302 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms