RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
TPM1-216ENST00000558910 OR4B1Q8NGF8 309 aa8.78□□□□□ -1
TPM1-216ENST00000558910 C16orf92Q96LL3 132 aa8.78□□□□□ -1
TPM1-216ENST00000558910 UHRF2Q96PU4 802 aa8.78□□□□□ -1
TPM1-216ENST00000558910 SCRT1Q9BWW7 348 aa8.78□□□□□ -1
TPM1-216ENST00000558910 SLC25A32Q9H2D1 315 aa8.78□□□□□ -1
TPM1-216ENST00000558910 FBXL17Q9UF56 701 aa8.78□□□□□ -1
TPM1-216ENST00000558910 TP53TG1Q9Y2A0 90 aa8.78□□□□□ -1
TPM1-216ENST00000558910 LYSTQ99698 3801 aa8.77□□□□□ -1
TPM1-216ENST00000558910 IGHV3OR16-12A0A075B7B8 117 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 ZNF98A6NK75 572 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 LINC00869P0C866 280 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 NUP62P37198 522 aaPredicted RBP8.77□□□□□ -1.01
TPM1-216ENST00000558910 ID1P41134 155 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 NANOS2P60321 138 aaKnown RBP8.77□□□□□ -1.01
TPM1-216ENST00000558910 TMEM14EPQ6UXP3 125 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 TMEM144Q7Z5S9 345 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 NRARPQ7Z6K4 114 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 C2orf50Q96LR7 162 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 ARL6Q9H0F7 186 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 XCL2Q9UBD3 114 aa8.77□□□□□ -1.01
TPM1-216ENST00000558910 TSC22D2O75157 780 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 GALR1P47211 349 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 RAP2BP61225 183 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 DLK1P80370 383 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 RAB32Q13637 225 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 LRRC37A5PQ49AS3 106 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 C20orf173Q96LM9 149 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 HIGD1AQ9Y241 93 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 ALMS1Q8TCU4 4167 aa8.76□□□□□ -1.01
TPM1-216ENST00000558910 BIRC6Q9NR09 4857 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 INMT-MINDY4F8WBC2 141 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 H3BTX0 84 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 HYPMO75409 117 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 GIG44P09565 113 aaPredicted RBP8.75□□□□□ -1.01
TPM1-216ENST00000558910 ZNF705DP0CH99 300 aaPredicted RBP8.75□□□□□ -1.01
TPM1-216ENST00000558910 ZNF705BP0CI00 300 aaPredicted RBP8.75□□□□□ -1.01
TPM1-216ENST00000558910 PVALBP20472 110 aaPredicted RBP8.75□□□□□ -1.01
TPM1-216ENST00000558910 TEPPQ6URK8 271 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 LINC00299Q6ZSB3 139 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 RNF182Q8N6D2 247 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 SLC25A39Q9BZJ4 359 aaPredicted RBP8.75□□□□□ -1.01
TPM1-216ENST00000558910 GPN1Q9HCN4 374 aaPredicted RBP8.75□□□□□ -1.01
TPM1-216ENST00000558910 NPVFQ9HCQ7 196 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 DNAH1Q9P2D7 4330 aa8.75□□□□□ -1.01
TPM1-216ENST00000558910 IGHV4-28A0A0C4DH34 117 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 LCE6AA0A183 80 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 UBE2L5PA0A1B0GUS4 154 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 H3BMM0 161 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 AGPAT2O15120 278 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 CFDP00746 253 aaPredicted RBP8.74□□□□□ -1.01
TPM1-216ENST00000558910 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 ZNF767PQ75MW2 155 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 LRRC20Q8TCA0 184 aa8.74□□□□□ -1.01
TPM1-216ENST00000558910 IGSF23A1L1A6 192 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 H3BRN7 92 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 SSNA1O43805 119 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 JTBO76095 146 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 SPP1P10451 314 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 EMP1P54849 157 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 TAS2R30P59541 319 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 BAXQ07812 192 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 MIC13Q5XKP0 118 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 EBLN2Q6P2I7 272 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 MORN3Q6PF18 240 aaPredicted RBP8.73□□□□□ -1.01
TPM1-216ENST00000558910 PATE2Q6UY27 113 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 C11orf45Q8TAV5 145 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 MGST2Q99735 147 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 SLC35B3Q9H1N7 401 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 ARV1Q9H2C2 271 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 HYDINQ4G0P3 5121 aa8.73□□□□□ -1.01
TPM1-216ENST00000558910 SOCS3O14543 225 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 HLA-DRB4P13762 266 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 CAMLGP49069 296 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 PSMB3P49720 205 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 DEFA1P59665 94 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 DEFA3P59666 94 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 NUTF2P61970 127 aaKnown RBP8.72□□□□□ -1.01
TPM1-216ENST00000558910 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 ZNF738Q8NE65 137 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 PHLDA1Q8WV24 401 aaPredicted RBP8.72□□□□□ -1.01
TPM1-216ENST00000558910 C17orf77Q96MU5 243 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 SHANK2-AS3Q9BTD1 123 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 UQCC1Q9NVA1 299 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 HLA-DRB4X5D2U9 266 aa8.72□□□□□ -1.01
TPM1-216ENST00000558910 TRAV5A0A0B4J249 113 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 ISLRO14498 428 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 DEDDO75618 318 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 LY6G6CO95867 125 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.02
TPM1-216ENST00000558910 RBMY1CP0DJD4 496 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 FGF7P21781 194 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 SELENOTP62341 195 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.02
TPM1-216ENST00000558910 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 LINC00305Q7Z4B0 112 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms