RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
LINC01220-201ENST00000558575 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
LINC01220-201ENST00000558575 TNFSF18Q9UNG2 199 aa11.51□□□□□ -0.57
LINC01220-201ENST00000558575 HIGD1AQ9Y241 93 aa11.51□□□□□ -0.57
LINC01220-201ENST00000558575 RFNGQ9Y644 331 aa11.51□□□□□ -0.57
LINC01220-201ENST00000558575 TRAV2A0A0B4J234 112 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 MPDU1O75352 247 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 MORN5Q5VZ52 161 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
LINC01220-201ENST00000558575 STXBP6Q8NFX7 210 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 OR11H4Q8NGC9 324 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 PPP1R14BQ96C90 147 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 ST6GAL2Q96JF0 529 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 SLC25A32Q9H2D1 315 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 FBXL17Q9UF56 701 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 PFDN2Q9UHV9 154 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 PXMP4Q9Y6I8 212 aa11.5□□□□□ -0.57
LINC01220-201ENST00000558575 FXYD6-FXYD2A0A087WZ82 144 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 DNASE2O00115 360 aaPredicted RBP11.49□□□□□ -0.57
LINC01220-201ENST00000558575 FRMD6-AS1P0C7T7 363 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 NUP62P37198 522 aaPredicted RBP11.49□□□□□ -0.57
LINC01220-201ENST00000558575 AP2S1P53680 142 aaPredicted RBP11.49□□□□□ -0.57
LINC01220-201ENST00000558575 B2MP61769 119 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 PAFAH1B2P68402 229 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 ZNF124Q15973 351 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 OR8I2Q8N0Y5 310 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 SLC25A22Q9H936 323 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 DNAJC4Q9NNZ3 241 aa11.49□□□□□ -0.57
LINC01220-201ENST00000558575 A0A1B0GVG6 124 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
LINC01220-201ENST00000558575 Q6ZRG5 221 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 APRG1Q8IVJ8 170 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 RSG1Q9BU20 258 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
LINC01220-201ENST00000558575 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 EDA2RQ9HAV5 297 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
LINC01220-201ENST00000558575 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
LINC01220-201ENST00000558575 TRAV5A0A0B4J249 113 aa11.47□□□□□ -0.57
LINC01220-201ENST00000558575 SOCS3O14543 225 aa11.47□□□□□ -0.57
LINC01220-201ENST00000558575 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
LINC01220-201ENST00000558575 C10orf113Q5VZT2 155 aa11.47□□□□□ -0.57
LINC01220-201ENST00000558575 INO80EQ8NBZ0 244 aaPredicted RBP11.47□□□□□ -0.57
LINC01220-201ENST00000558575 SRD5A3Q9H8P0 318 aa11.47□□□□□ -0.57
LINC01220-201ENST00000558575 hCG_2014768A0A024R1R8 64 aa11.46□□□□□ -0.57
LINC01220-201ENST00000558575 IFNA5P01569 189 aa11.46□□□□□ -0.57
LINC01220-201ENST00000558575 DEFB131AP59861 70 aa11.46□□□□□ -0.57
LINC01220-201ENST00000558575 TUBA4BQ9H853 241 aa11.46□□□□□ -0.57
LINC01220-201ENST00000558575 KIAA1109Q2LD37 5005 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 ARPC5O15511 151 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 JTBO76095 146 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 ZNF688P0C7X2 276 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
LINC01220-201ENST00000558575 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 ZNF709Q8N972 641 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 OR1L4Q8NGR5 311 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 GATAD1Q8WUU5 269 aa11.45□□□□□ -0.58
LINC01220-201ENST00000558575 GALR1P47211 349 aa11.44□□□□□ -0.58
LINC01220-201ENST00000558575 RPL7L1Q6DKI1 246 aaKnown RBP11.44□□□□□ -0.58
LINC01220-201ENST00000558575 GPR82Q96P67 336 aa11.44□□□□□ -0.58
LINC01220-201ENST00000558575 MFFQ9GZY8 342 aa11.44□□□□□ -0.58
LINC01220-201ENST00000558575 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
LINC01220-201ENST00000558575 CYTL1Q9NRR1 136 aa11.44□□□□□ -0.58
LINC01220-201ENST00000558575 TRAV8-2A0A0B4J237 113 aa11.43□□□□□ -0.58
LINC01220-201ENST00000558575 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
LINC01220-201ENST00000558575 C17orf112F2Z3M2 114 aa11.43□□□□□ -0.58
LINC01220-201ENST00000558575 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
LINC01220-201ENST00000558575 RPL7P18124 248 aaKnown RBP11.43□□□□□ -0.58
LINC01220-201ENST00000558575 S100A7P31151 101 aa11.43□□□□□ -0.58
LINC01220-201ENST00000558575 HAGHQ16775 308 aa11.43□□□□□ -0.58
LINC01220-201ENST00000558575 PFDN5Q99471 154 aa11.43□□□□□ -0.58
LINC01220-201ENST00000558575 H3BQ15 152 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 CXCL2P19875 107 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 DEFB1P60022 68 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 CD300CQ08708 224 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 ZNF266Q14584 549 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 MIR17HGQ75NE6 70 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 S100A7AQ86SG5 101 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 TCTE3Q8IZS6 198 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 HSD17B11Q8NBQ5 300 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 FAM167A-AS1Q96KT0 104 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 C20orf173Q96LM9 149 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 TIMM9Q9Y5J7 89 aa11.42□□□□□ -0.58
LINC01220-201ENST00000558575 AGRNO00468 2067 aa11.41□□□□□ -0.58
LINC01220-201ENST00000558575 A0A087X0K7 114 aa11.41□□□□□ -0.58
LINC01220-201ENST00000558575 KNCNA6PVL3 124 aa11.41□□□□□ -0.58
LINC01220-201ENST00000558575 IGLC2P0DOY2 106 aa11.41□□□□□ -0.58
LINC01220-201ENST00000558575 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
LINC01220-201ENST00000558575 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms