RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
TPM1-214ENST00000558544 C1orf194Q5T5A4 169 aa13.05□□□□□ -0.32
TPM1-214ENST00000558544 LINC00305Q7Z4B0 112 aa13.05□□□□□ -0.32
TPM1-214ENST00000558544 Q8N1Y9 231 aa13.05□□□□□ -0.32
TPM1-214ENST00000558544 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
TPM1-214ENST00000558544 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
TPM1-214ENST00000558544 C4BPBP20851 252 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 GCSAMLQ5JQS6 135 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 S100A7AQ86SG5 101 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 PFDN5Q99471 154 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 WFDC10AQ9H1F0 79 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 DNAJC4Q9NNZ3 241 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 UBQLN2Q9UHD9 624 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
TPM1-214ENST00000558544 DEFB121Q5J5C9 76 aa13.03□□□□□ -0.32
TPM1-214ENST00000558544 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
TPM1-214ENST00000558544 RPL7L1Q6DKI1 246 aaKnown RBP13.03□□□□□ -0.32
TPM1-214ENST00000558544 KANTRA0A1W2PQU2 76 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 RGS13O14921 159 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 FFAR4Q5NUL3 377 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 DCANP1Q8TF63 244 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 ARPC5LQ9BPX5 153 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 NRN1Q9NPD7 142 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 SMAD5-AS1Q9Y6J3 95 aa13.02□□□□□ -0.33
TPM1-214ENST00000558544 BORCS7-ASMTA0A0B4J1R7 106 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 TRAV2A0A0B4J234 112 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 K7EQG2 157 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 GALR1P47211 349 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 ODF3L2Q3SX64 289 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 GATAD1Q8WUU5 269 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 GPR82Q96P67 336 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 TIMM9Q9Y5J7 89 aa13.01□□□□□ -0.33
TPM1-214ENST00000558544 OR11H12B2RN74 326 aa13□□□□□ -0.33
TPM1-214ENST00000558544 TAAR5O14804 337 aa13□□□□□ -0.33
TPM1-214ENST00000558544 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
TPM1-214ENST00000558544 ATP6V0CP27449 155 aa13□□□□□ -0.33
TPM1-214ENST00000558544 DEFB125Q8N687 156 aa13□□□□□ -0.33
TPM1-214ENST00000558544 MAP6D1Q9H9H5 199 aa13□□□□□ -0.33
TPM1-214ENST00000558544 TRAV5A0A0B4J249 113 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 FAM78BQ5VT40 261 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 SPATA31B1PQ5VZV4 182 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 TEX261Q6UWH6 196 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 SLC51BQ86UW2 128 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 RNF24Q9Y225 148 aa12.99□□□□□ -0.33
TPM1-214ENST00000558544 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
TPM1-214ENST00000558544 ATF4P18848 351 aaPredicted RBP12.98□□□□□ -0.33
TPM1-214ENST00000558544 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
TPM1-214ENST00000558544 PSMG3Q9BT73 122 aaPredicted RBP12.98□□□□□ -0.33
TPM1-214ENST00000558544 ZNF471Q9BX82 626 aaPredicted RBP12.98□□□□□ -0.33
TPM1-214ENST00000558544 SEPSECSQ9HD40 501 aaKnown RBP12.98□□□□□ -0.33
TPM1-214ENST00000558544 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
TPM1-214ENST00000558544 JTBO76095 146 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 ZNF124Q15973 351 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 MIR17HGQ75NE6 70 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 BPIFA4PQ86YQ2 179 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 ZNF680Q8NEM1 530 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 SRD5A3Q9H8P0 318 aa12.97□□□□□ -0.33
TPM1-214ENST00000558544 SOCS3O14543 225 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 SNRPCP09234 159 aaKnown RBP12.96□□□□□ -0.33
TPM1-214ENST00000558544 DEFB131AP59861 70 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 RAB2AP61019 212 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.33
TPM1-214ENST00000558544 OR2G3Q8NGZ4 309 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 CITED4Q96RK1 184 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 FAM110AQ9BQ89 295 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 MRPL32Q9BYC8 188 aaKnown RBP12.96□□□□□ -0.33
TPM1-214ENST00000558544 TUBA4BQ9H853 241 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 FUT9Q9Y231 359 aa12.96□□□□□ -0.33
TPM1-214ENST00000558544 AGRNO00468 2067 aa12.96□□□□□ -0.34
TPM1-214ENST00000558544 A0A087X0K7 114 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 FRMD6-AS1P0C7T7 363 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 M6PRP20645 277 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 MEOX2P50222 304 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 CMC4P56277 68 aaPredicted RBP12.95□□□□□ -0.34
TPM1-214ENST00000558544 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 GNPNAT1Q96EK6 184 aaPredicted RBP12.95□□□□□ -0.34
TPM1-214ENST00000558544 C16orf92Q96LL3 132 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 DNAH9Q9NYC9 4486 aa12.95□□□□□ -0.34
TPM1-214ENST00000558544 A8MZ25 164 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
TPM1-214ENST00000558544 RHOBP62745 196 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 FAM122CQ6P4D5 195 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 H3BTX0 84 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 EIF3GO75821 320 aaKnown RBP eCLIP12.94□□□□□ -0.34
TPM1-214ENST00000558544 IGLC2P0DOY2 106 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 PYYP10082 97 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 TPT1P13693 172 aaKnown RBP12.94□□□□□ -0.34
TPM1-214ENST00000558544 ID1P41134 155 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 PSMB3P49720 205 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms