RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PRR20DP86480 221 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 PRR20BP86481 221 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 PRR20AP86496 221 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 LINC00305Q7Z4B0 112 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 ATP5SQ99766 215 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 RSG1Q9BU20 258 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 NPCDR1Q9BY65 106 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 SEPSECSQ9HD40 501 aaKnown RBP9.13□□□□□ -0.95
SMAD3-205ENST00000558428 RETNQ9HD89 108 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 DNAH7Q8WXX0 4024 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 ELOA3CA0A087WX78 387 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-205ENST00000558428 KNCNA6PVL3 124 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 RPL7P18124 248 aaKnown RBP9.12□□□□□ -0.95
SMAD3-205ENST00000558428 ATF4P18848 351 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-205ENST00000558428 ID1P41134 155 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 MEOX2P50222 304 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 FGL1Q08830 312 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 C10orf113Q5VZT2 155 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 STHQ8IWL8 128 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 OR1L4Q8NGR5 311 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 SMIM3Q9BZL3 60 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 WDR61Q9GZS3 305 aaKnown RBP9.12□□□□□ -0.95
SMAD3-205ENST00000558428 RNF24Q9Y225 148 aa9.12□□□□□ -0.95
SMAD3-205ENST00000558428 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 SOCS3O14543 225 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 PSMB3P49720 205 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 Q5BKY6 102 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 ACTL10Q5JWF8 245 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 SAMD13Q5VXD3 122 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 ZNF709Q8N972 641 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 LINC00052Q96N35 136 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 PFDN5Q99471 154 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 DNAJC4Q9NNZ3 241 aa9.11□□□□□ -0.95
SMAD3-205ENST00000558428 C17orf112F2Z3M2 114 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 UBE2CO00762 179 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 ISLRO14498 428 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 IFNA5P01569 189 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 OR2T35Q8NGX2 323 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 C17orf77Q96MU5 243 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 CSTL1Q9H114 145 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 KCNIP2Q9NS61 270 aa9.1□□□□□ -0.95
SMAD3-205ENST00000558428 FXYD6-FXYD2A0A087WZ82 144 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 MORN5Q5VZ52 161 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
SMAD3-205ENST00000558428 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 SCGB1C1Q8TD33 95 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 GATAD1Q8WUU5 269 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 WFDC1Q9HC57 220 aa9.09□□□□□ -0.95
SMAD3-205ENST00000558428 A0A087X0K7 114 aa9.08□□□□□ -0.96
SMAD3-205ENST00000558428 MRPS12O15235 138 aaKnown RBP9.08□□□□□ -0.96
SMAD3-205ENST00000558428 CA1P00915 261 aaPredicted RBP9.08□□□□□ -0.96
SMAD3-205ENST00000558428 DEFB1P60022 68 aa9.08□□□□□ -0.96
SMAD3-205ENST00000558428 GCSAMLQ5JQS6 135 aa9.08□□□□□ -0.96
SMAD3-205ENST00000558428 Q6ZWC4 215 aa9.08□□□□□ -0.96
SMAD3-205ENST00000558428 OVOL2Q9BRP0 275 aa9.08□□□□□ -0.96
SMAD3-205ENST00000558428 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 SPRY2O43597 315 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 SNRPCP09234 159 aaKnown RBP9.07□□□□□ -0.96
SMAD3-205ENST00000558428 SPP1P10451 314 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 HLA-DRB4P13762 266 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 IGFL4Q6B9Z1 124 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 FOXI2Q6ZQN5 318 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 INO80EQ8NBZ0 244 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-205ENST00000558428 LRRC20Q8TCA0 184 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 C20orf173Q96LM9 149 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 PARD6GQ9BYG4 376 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-205ENST00000558428 RPRMQ9NS64 109 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 HLA-DRB4X5D2U9 266 aa9.07□□□□□ -0.96
SMAD3-205ENST00000558428 TRAV8-2A0A0B4J237 113 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 H3BMM0 161 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 ZNF266Q14584 549 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 FFAR4Q5NUL3 377 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 GDF5OSQ5U4N7 250 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 EBLN2Q6P2I7 272 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 MORN3Q6PF18 240 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-205ENST00000558428 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 RNF183Q96D59 192 aa9.06□□□□□ -0.96
SMAD3-205ENST00000558428 SAV1Q9H4B6 383 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-205ENST00000558428 F6UB75 175 aa9.05□□□□□ -0.96
SMAD3-205ENST00000558428 G3V3Q6 166 aa9.05□□□□□ -0.96
SMAD3-205ENST00000558428 H3BTX0 84 aa9.05□□□□□ -0.96
SMAD3-205ENST00000558428 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
SMAD3-205ENST00000558428 CXCL2P19875 107 aa9.05□□□□□ -0.96
SMAD3-205ENST00000558428 NUTF2P61970 127 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms