RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 C11orf1Q9H5F2 150 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 UQCC1Q9NVA1 299 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 AGPAT2O15120 278 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 MPDU1O75352 247 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 CCNKO75909 580 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 CST7O76096 145 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 PTTG1O95997 202 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 OR5G3P0C626 314 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 PET100P0DJ07 73 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
TPM1-213ENST00000558400 CAMLGP49069 296 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 PSMB3P49720 205 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 PSMG4Q5JS54 123 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 TMEM182Q6ZP80 229 aaPredicted RBP6.24□□□□□ -1.41
TPM1-213ENST00000558400 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 TMEM217Q8N7C4 229 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 RSG1Q9BU20 258 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 C1QTNF4Q9BXJ3 329 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 SLC25A39Q9BZJ4 359 aaPredicted RBP6.24□□□□□ -1.41
TPM1-213ENST00000558400 ARL6Q9H0F7 186 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 SLC25A22Q9H936 323 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 DNAJC4Q9NNZ3 241 aa6.24□□□□□ -1.41
TPM1-213ENST00000558400 SIX6O95475 246 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 RPL29P47914 159 aaKnown RBP6.23□□□□□ -1.41
TPM1-213ENST00000558400 BAXQ07812 192 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 ZNF124Q15973 351 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 VWC2Q2TAL6 325 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 DEFB135Q30KP9 77 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 ACTL10Q5JWF8 245 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
TPM1-213ENST00000558400 OR1L4Q8NGR5 311 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 PPP1R1CQ8WVI7 109 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 LINC00052Q96N35 136 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 RARRES2Q99969 163 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 ARV1Q9H2C2 271 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 RETNQ9HD89 108 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 RPRMQ9NS64 109 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 WDR83OSQ9Y284 106 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
TPM1-213ENST00000558400 IGSF23A1L1A6 192 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 H3BMM0 161 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 H3BRN7 92 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 CA1P00915 261 aaPredicted RBP6.22□□□□□ -1.41
TPM1-213ENST00000558400 H2BFSP57053 126 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 CASC10Q5T4H9 136 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 EBLN2Q6P2I7 272 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 FOXI2Q6ZQN5 318 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 LINC00305Q7Z4B0 112 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 LRRC20Q8TCA0 184 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 PFDN5Q99471 154 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 MGST2Q99735 147 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 SLC25A32Q9H2D1 315 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 CLEC5AQ9NY25 188 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 DOK5Q9P104 306 aa6.22□□□□□ -1.41
TPM1-213ENST00000558400 LCE6AA0A183 80 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 KNCNA6PVL3 124 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 SOCS3O14543 225 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 MPC2O95563 127 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 HLA-DRB4P13762 266 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 NHLH2Q02577 135 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 RGS21Q2M5E4 152 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 LRRC37A5PQ49AS3 106 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 PATE2Q6UY27 113 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 ZNF709Q8N972 641 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 OR5C1Q8NGR4 320 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 OR11H2Q8NH07 326 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 ASB13Q8WXK3 278 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 RNF126Q9BV68 326 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 MED28Q9H204 178 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 SAV1Q9H4B6 383 aaPredicted RBP6.21□□□□□ -1.42
TPM1-213ENST00000558400 HLA-DRB4X5D2U9 266 aa6.21□□□□□ -1.42
TPM1-213ENST00000558400 A0A087X0K7 114 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 H0YIZ8 118 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
TPM1-213ENST00000558400 CXCL2P19875 107 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 FGF7P21781 194 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 B2MP61769 119 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 EWSR1Q01844 656 aaKnown RBP eCLIP6.2□□□□□ -1.42
TPM1-213ENST00000558400 FGL1Q08830 312 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 GUK1Q16774 197 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 MIC13Q5XKP0 118 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 THAP6Q8TBB0 222 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 TMEM37Q8WXS4 190 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 UHRF2Q96PU4 802 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 SCRT1Q9BWW7 348 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 KCNIP2Q9NS61 270 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 SLC39A9Q9NUM3 307 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 OR5AC2Q9NZP5 309 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 ALG5Q9Y673 324 aa6.2□□□□□ -1.42
TPM1-213ENST00000558400 STAB2Q8WWQ8 2551 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 LYSTQ99698 3801 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 A0A0J9YWU9 116 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms