RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGKV3-20P01619 116 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 PDE6HQ13956 83 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 RBMY1FQ15415 496 aaKnown RBP9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 JPT2Q9H910 190 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 UNC13CQ8NB66 2214 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 SYNJ2BPP57105 145 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 SLC25A16P16260 332 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 UNQ6494/PRO21346Q6UXR6 183 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 FAM216BQ8N7L0 139 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGHV3-49A0A0A0MS15 119 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGKV1D-33P01593 117 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGKV1-33P01594 117 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 LCNL1Q6ZST4 164 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 TMEM167AQ8TBQ9 72 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 OTOFQ9HC10 1997 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 TGFBR3LH3BV60 316 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGHV3-23P01764 117 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 FOXI2Q6ZQN5 318 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 NTN5Q8WTR8 489 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 RALGAPA2Q2PPJ7 1873 aa9.63□□□□□ -0.87
CSPG4P12-201ENST00000558282 A0A0G2JRQ6 117 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 B9A039 149 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 Q6ZRM9 215 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 HAPLN4Q86UW8 402 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGKV2-40A0A087WW87 121 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 ADARB2-AS1A8MUL3 147 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 C5orf67F2Z3F1 127 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 ATOX1O00244 68 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGKV2D-40P01614 121 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 CECR9P0C854 216 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 RBM3P98179 157 aaKnown RBP9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 S4R3C0 116 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 PRSS57Q6UWY2 283 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 ANKRD36A6QL64 1941 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 F8VRH5 84 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 MYOD1P15172 320 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 MALP21145 153 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 NPC2P61916 151 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 ZNF837Q96EG3 531 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
CSPG4P12-201ENST00000558282 CTSBP07858 339 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 IL15RAQ13261 267 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 LINC00477Q96M19 166 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 RNF5Q99942 180 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 SHISA9B4DS77 424 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 PAX9P55771 341 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 Q6ZVH6 145 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 TEN1Q86WV5 123 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 SPTBN2O15020 2390 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 RPUSD1Q9UJJ7 312 aaKnown RBP9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 TRIP12Q14669 1992 aaPredicted RBP9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGLL5B9A064 214 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 LINC01587Q99440 93 aa9.61□□□□□ -0.87
CSPG4P12-201ENST00000558282 K7ERJ3 54 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 LINC01545Q5VT33 79 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 C9orf139Q6ZV77 190 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 RCHY1Q96PM5 261 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 PIKFYVEQ9Y2I7 2098 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 C2orf66Q6UXQ4 117 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 ZNF747Q9BV97 191 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 TMEM133Q9H2Q1 129 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 AKAP6Q13023 2319 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 VWC2Q2TAL6 325 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 CYYR1Q96J86 154 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 A0A0G2JMZ2 1700 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 MRPL14Q6P1L8 145 aaKnown RBP9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 IMMP1LQ96LU5 166 aa9.6□□□□□ -0.87
CSPG4P12-201ENST00000558282 PRIMA1Q86XR5 153 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 CFHR2P36980 270 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 PRR31Q5SQ13 230 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 ANKRD39Q53RE8 183 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 MORN5Q5VZ52 161 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 ZNF114Q8NC26 417 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
CSPG4P12-201ENST00000558282 STPG1Q5TH74 334 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 SIGLEC15Q6ZMC9 328 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 ZNF625Q96I27 306 aaPredicted RBP9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 MRPL35Q9NZE8 188 aaKnown RBP9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
CSPG4P12-201ENST00000558282 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms