RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FAM24BQ8N5W8 94 aa19.01■□□□□ 0.63
SMAD6-202ENST00000557916 PFDN5Q99471 154 aa19.01■□□□□ 0.63
SMAD6-202ENST00000557916 PARD6GQ9BYG4 376 aaPredicted RBP19.01■□□□□ 0.63
SMAD6-202ENST00000557916 RNF24Q9Y225 148 aa19.01■□□□□ 0.63
SMAD6-202ENST00000557916 hCG_2014768A0A024R1R8 64 aa19■□□□□ 0.63
SMAD6-202ENST00000557916 B9D2Q9BPU9 175 aa19■□□□□ 0.63
SMAD6-202ENST00000557916 RSG1Q9BU20 258 aa19■□□□□ 0.63
SMAD6-202ENST00000557916 MAP6D1Q9H9H5 199 aa19■□□□□ 0.63
SMAD6-202ENST00000557916 ARPC5O15511 151 aa19■□□□□ 0.63
SMAD6-202ENST00000557916 RPL7P18124 248 aaKnown RBP18.99■□□□□ 0.63
SMAD6-202ENST00000557916 ZNF266Q14584 549 aa18.99■□□□□ 0.63
SMAD6-202ENST00000557916 CITED4Q96RK1 184 aa18.99■□□□□ 0.63
SMAD6-202ENST00000557916 ZNF688P0C7X2 276 aa18.98■□□□□ 0.63
SMAD6-202ENST00000557916 DEFB131AP59861 70 aa18.98■□□□□ 0.63
SMAD6-202ENST00000557916 APRG1Q8IVJ8 170 aa18.98■□□□□ 0.63
SMAD6-202ENST00000557916 GATAD1Q8WUU5 269 aa18.98■□□□□ 0.63
SMAD6-202ENST00000557916 GCSAMLQ5JQS6 135 aa18.97■□□□□ 0.63
SMAD6-202ENST00000557916 MORN5Q5VZ52 161 aa18.97■□□□□ 0.63
SMAD6-202ENST00000557916 ST6GAL2Q96JF0 529 aa18.97■□□□□ 0.63
SMAD6-202ENST00000557916 MFFQ9GZY8 342 aa18.97■□□□□ 0.63
SMAD6-202ENST00000557916 OR11H4Q8NGC9 324 aa18.96■□□□□ 0.63
SMAD6-202ENST00000557916 ASCL2Q99929 193 aa18.96■□□□□ 0.63
SMAD6-202ENST00000557916 RBMY1BA6NDE4 496 aaKnown RBP18.95■□□□□ 0.62
SMAD6-202ENST00000557916 RBMY1EA6NEQ0 496 aaKnown RBP18.95■□□□□ 0.62
SMAD6-202ENST00000557916 RBMY1DP0C7P1 496 aaKnown RBP18.95■□□□□ 0.62
SMAD6-202ENST00000557916 ATF4P18848 351 aaPredicted RBP18.95■□□□□ 0.62
SMAD6-202ENST00000557916 SNRPD3P62318 126 aaKnown RBP18.95■□□□□ 0.62
SMAD6-202ENST00000557916 ZNF124Q15973 351 aa18.95■□□□□ 0.62
SMAD6-202ENST00000557916 C17orf77Q96MU5 243 aa18.95■□□□□ 0.62
SMAD6-202ENST00000557916 SEPSECSQ9HD40 501 aaKnown RBP18.95■□□□□ 0.62
SMAD6-202ENST00000557916 ID1P41134 155 aa18.94■□□□□ 0.62
SMAD6-202ENST00000557916 MEOX2P50222 304 aa18.94■□□□□ 0.62
SMAD6-202ENST00000557916 PSMG4Q5JS54 123 aa18.94■□□□□ 0.62
SMAD6-202ENST00000557916 FFAR4Q5NUL3 377 aa18.94■□□□□ 0.62
SMAD6-202ENST00000557916 LINC00322Q6ZN03 302 aaPredicted RBP18.94■□□□□ 0.62
SMAD6-202ENST00000557916 BPIFA4PQ86YQ2 179 aa18.94■□□□□ 0.62
SMAD6-202ENST00000557916 HSD17B11Q8NBQ5 300 aa18.94■□□□□ 0.62
SMAD6-202ENST00000557916 TRAV5A0A0B4J249 113 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 HMSDA8MTL9 139 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 SOCS3O14543 225 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 SBSPONQ8IVN8 264 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 TIMM9Q9Y5J7 89 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 RFNGQ9Y644 331 aa18.93■□□□□ 0.62
SMAD6-202ENST00000557916 MRPS12O15235 138 aaKnown RBP18.92■□□□□ 0.62
SMAD6-202ENST00000557916 FAM78BQ5VT40 261 aa18.92■□□□□ 0.62
SMAD6-202ENST00000557916 SAMD13Q5VXD3 122 aa18.92■□□□□ 0.62
SMAD6-202ENST00000557916 BORCS7-ASMTA0A0B4J1R7 106 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 PSMB3P49720 205 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 RPL7L1Q6DKI1 246 aaKnown RBP18.91■□□□□ 0.62
SMAD6-202ENST00000557916 TCTE3Q8IZS6 198 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 C16orf92Q96LL3 132 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 TGP01266 2768 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 A0A087X0K7 114 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 LOC102724200A0A096LPH7 203 aaPredicted RBP18.91■□□□□ 0.62
SMAD6-202ENST00000557916 A0A1B0GVG6 124 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 ISLRO14498 428 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 TAAR5O14804 337 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 ZNF345Q14585 488 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 HAGHQ16775 308 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 LINC00052Q96N35 136 aa18.91■□□□□ 0.62
SMAD6-202ENST00000557916 ATP6V0CP27449 155 aa18.9■□□□□ 0.62
SMAD6-202ENST00000557916 SPATA31B1PQ5VZV4 182 aa18.9■□□□□ 0.62
SMAD6-202ENST00000557916 AKAP14Q86UN6 197 aa18.9■□□□□ 0.62
SMAD6-202ENST00000557916 KCNRGQ8N5I3 272 aa18.9■□□□□ 0.62
SMAD6-202ENST00000557916 MIR17HGQ75NE6 70 aa18.89■□□□□ 0.61
SMAD6-202ENST00000557916 PSMG3Q9BT73 122 aaPredicted RBP18.89■□□□□ 0.61
SMAD6-202ENST00000557916 MRPL32Q9BYC8 188 aaKnown RBP18.89■□□□□ 0.61
SMAD6-202ENST00000557916 DNAH9Q9NYC9 4486 aa18.89■□□□□ 0.61
SMAD6-202ENST00000557916 SNRPCP09234 159 aaKnown RBP18.88■□□□□ 0.61
SMAD6-202ENST00000557916 NHLRC4P0CG21 123 aaPredicted RBP18.88■□□□□ 0.61
SMAD6-202ENST00000557916 FUT9Q9Y231 359 aa18.88■□□□□ 0.61
SMAD6-202ENST00000557916 A0A0D9SG52 128 aa18.87■□□□□ 0.61
SMAD6-202ENST00000557916 KNCNA6PVL3 124 aa18.87■□□□□ 0.61
SMAD6-202ENST00000557916 JTBO76095 146 aa18.87■□□□□ 0.61
SMAD6-202ENST00000557916 RPL35AP18077 110 aaKnown RBP18.87■□□□□ 0.61
SMAD6-202ENST00000557916 ACOT6Q3I5F7 207 aaPredicted RBP18.87■□□□□ 0.61
SMAD6-202ENST00000557916 LRRC20Q8TCA0 184 aa18.87■□□□□ 0.61
SMAD6-202ENST00000557916 IGLC2P0DOY2 106 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 CXCL2P19875 107 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 M6PRP20645 277 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 IGFL4Q6B9Z1 124 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 OR2G3Q8NGZ4 309 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 GNPNAT1Q96EK6 184 aaPredicted RBP18.86■□□□□ 0.61
SMAD6-202ENST00000557916 ARPC5LQ9BPX5 153 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 SLC25A2Q9BXI2 301 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 HRH4Q9H3N8 390 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 CYTL1Q9NRR1 136 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 TMEM14CQ9P0S9 112 aa18.86■□□□□ 0.61
SMAD6-202ENST00000557916 TRAV8-2A0A0B4J237 113 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 H3BQ15 152 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 RHOBP62745 196 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 ACTL10Q5JWF8 245 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 LCN15Q6UWW0 184 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 STHQ8IWL8 128 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 C20orf173Q96LM9 149 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 SH3BGRL3Q9H299 93 aa18.85■□□□□ 0.61
SMAD6-202ENST00000557916 H3BTX0 84 aa18.84■□□□□ 0.61
SMAD6-202ENST00000557916 APOC4P55056 127 aa18.84■□□□□ 0.61
SMAD6-202ENST00000557916 RAB2AP61019 212 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms