RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CYP2G1PQ6ZSU1 146 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 LINC00336Q6ZUF6 198 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 C1orf158Q8N1D5 194 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 FAM210BQ96KR6 192 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 HIGD1AQ9Y241 93 aa10.45□□□□□ -0.74
SHMT2-235ENST00000557740 YTHDF2Q9Y5A9 579 aaKnown RBP10.45□□□□□ -0.74
SHMT2-235ENST00000557740 DUSP14O95147 198 aaKnown RBP10.44□□□□□ -0.74
SHMT2-235ENST00000557740 INSP01308 110 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 LINC00869P0C866 280 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 HTN3P15516 51 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 RPL7P18124 248 aaKnown RBP10.44□□□□□ -0.74
SHMT2-235ENST00000557740 ID3Q02535 119 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 C4orf46Q504U0 113 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 S100A7AQ86SG5 101 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 UBE2DNLQ8IWF7 75 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 IGF2BP2-AS1Q96M15 143 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 SHANK2-AS3Q9BTD1 123 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-235ENST00000557740 RBM38Q9H0Z9 239 aaKnown RBP10.44□□□□□ -0.74
SHMT2-235ENST00000557740 FLVCR2Q9UPI3 526 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
SHMT2-235ENST00000557740 HECTD4Q9Y4D8 3996 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 LINC00854A0A1B0GVQ3 168 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 A8MTW9 85 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 ZNF701M0R085 212 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-235ENST00000557740 HYPMO75409 117 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 SCGB1D2O95969 90 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 OR5G3P0C626 314 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 OR4E1P0C645 316 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 CNN1P51911 297 aaKnown RBP10.43□□□□□ -0.74
SHMT2-235ENST00000557740 DAD1P61803 113 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-235ENST00000557740 SELENOTP62341 195 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 DLK1P80370 383 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 ZNF738Q8NE65 137 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 MGAT4CQ9UBM8 478 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
SHMT2-235ENST00000557740 VPS13DQ5THJ4 4388 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 CENPXA8MT69 81 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 M0R2Z0 102 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 OXA1LQ15070 435 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 BAK1Q16611 211 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 OR11H7Q8NGC8 314 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 SMIM8Q96KF7 97 aa10.42□□□□□ -0.74
SHMT2-235ENST00000557740 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 M0R2N4 97 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 CCNKO75909 580 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 METTL15P1P0C7V9 234 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 ANXA7P20073 488 aaKnown RBP10.41□□□□□ -0.74
SHMT2-235ENST00000557740 IAH1Q2TAA2 248 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-235ENST00000557740 BAP18Q8IXM2 172 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 OR10P1Q8NGE3 313 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 LRRC20Q8TCA0 184 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 UHRF2Q96PU4 802 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
SHMT2-235ENST00000557740 BOLA2-SMG1P6H3BVE0 249 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 PLP1P60201 277 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 B2MP61769 119 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-235ENST00000557740 TMEM14EPQ6UXP3 125 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 NPVFQ9HCQ7 196 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 PPP1R14DQ9NXH3 145 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 GSKIPQ9P0R6 139 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
SHMT2-235ENST00000557740 A0A087X0K7 114 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 PMS2P5A8MQ11 134 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 ZNF705GA8MUZ8 300 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-235ENST00000557740 FNDC10F2Z333 226 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 TSC22D2O75157 780 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 BTCP35070 178 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 TAS2R30P59541 319 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 RHOBP62745 196 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 TEPPQ6URK8 271 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 ZBTB8BQ8NAP8 495 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-235ENST00000557740 ARL6Q9H0F7 186 aa10.39□□□□□ -0.75
SHMT2-235ENST00000557740 RCL1Q9Y2P8 373 aaKnown RBP10.39□□□□□ -0.75
SHMT2-235ENST00000557740 LYRM9A8MSI8 78 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 K7EPK0 472 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 CRXO43186 299 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-235ENST00000557740 CXCL3P19876 107 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 TMEM88Q6PEY1 159 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 ZNF546Q86UE3 836 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 OR8A1Q8NGG7 326 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 SDHCQ99643 169 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-235ENST00000557740 ARV1Q9H2C2 271 aa10.38□□□□□ -0.75
SHMT2-235ENST00000557740 HERC2O95714 4834 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 IGLV2-18A0A075B6J9 118 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 PRSS29PA6NIE9 313 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 GOSR2O14653 212 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 IL7P13232 177 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 TSPOP30536 169 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms