RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PRR20BP86481 221 aa12.28□□□□□ -0.44
NEK9-211ENST00000557673 PRR20AP86496 221 aa12.28□□□□□ -0.44
NEK9-211ENST00000557673 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
NEK9-211ENST00000557673 WDR61Q9GZS3 305 aaKnown RBP12.28□□□□□ -0.44
NEK9-211ENST00000557673 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
NEK9-211ENST00000557673 HERC2O95714 4834 aa12.27□□□□□ -0.44
NEK9-211ENST00000557673 H3BRN7 92 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 HYPMO75409 117 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 RPL29P47914 159 aaKnown RBP12.27□□□□□ -0.45
NEK9-211ENST00000557673 ODF3L2Q3SX64 289 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 PXDC1Q5TGL8 231 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 PPP1R14BQ96C90 147 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 ARL6Q9H0F7 186 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 WFDC1Q9HC57 220 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.45
NEK9-211ENST00000557673 hCG_2014768A0A024R1R8 64 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 KIR2DL5BA0A0G2JN68 375 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 KIR2DL5BA0A0G2JPC4 375 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 HELTA6NFD8 242 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 OR4C46A6NHA9 309 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 C1orf194Q5T5A4 169 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 KIR2DL5AQ8N109 375 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 KIR2DL5BQ8NHK3 375 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
NEK9-211ENST00000557673 KCNIP2Q9NS61 270 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 PXMP4Q9Y6I8 212 aa12.26□□□□□ -0.45
NEK9-211ENST00000557673 IGKV3-7A0A075B6H7 116 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 TRAV2A0A0B4J234 112 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 COX7A2P2O60397 106 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 OR5G3P0C626 314 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 TFPI2P48307 235 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 B2MP61769 119 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 PATE2Q6UY27 113 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 SIGLEC15Q6ZMC9 328 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 INO80EQ8NBZ0 244 aaPredicted RBP12.25□□□□□ -0.45
NEK9-211ENST00000557673 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 UHRF2Q96PU4 802 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
NEK9-211ENST00000557673 ARV1Q9H2C2 271 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 SLC25A32Q9H2D1 315 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 MS4A6AQ9H2W1 248 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 SLC39A9Q9NUM3 307 aa12.25□□□□□ -0.45
NEK9-211ENST00000557673 ZNF98A6NK75 572 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 ARPC5O15511 151 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 IFNA5P01569 189 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 S100A7P31151 101 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 RPL11P62913 178 aaKnown RBP12.24□□□□□ -0.45
NEK9-211ENST00000557673 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 GBGT1Q8N5D6 347 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 STXBP6Q8NFX7 210 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 FRAS1Q86XX4 4008 aa12.24□□□□□ -0.45
NEK9-211ENST00000557673 PAFAH1B2P68402 229 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 ZNF266Q14584 549 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 LEMD1Q68G75 181 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 OR11H4Q8NGC9 324 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 DCANP1Q8TF63 244 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 TMEM37Q8WXS4 190 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 RNF183Q96D59 192 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 RSG1Q9BU20 258 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 SLC25A22Q9H936 323 aa12.23□□□□□ -0.45
NEK9-211ENST00000557673 ELOA3CA0A087WX78 387 aaPredicted RBP12.22□□□□□ -0.45
NEK9-211ENST00000557673 K7EQG2 157 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 ZNF124Q15973 351 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 C10orf113Q5VZT2 155 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 Q6ZRG5 221 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 APRG1Q8IVJ8 170 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 TCTE3Q8IZS6 198 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 OR8I2Q8N0Y5 310 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 RPP25LQ8N5L8 163 aaKnown RBP12.22□□□□□ -0.45
NEK9-211ENST00000557673 ZNF709Q8N972 641 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 OR1L4Q8NGR5 311 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 PFDN5Q99471 154 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 KMT2AQ03164 3969 aa12.22□□□□□ -0.45
NEK9-211ENST00000557673 A0A1B0GVG6 124 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 DNASE2O00115 360 aaPredicted RBP12.21□□□□□ -0.45
NEK9-211ENST00000557673 RPL35AP18077 110 aaKnown RBP12.21□□□□□ -0.45
NEK9-211ENST00000557673 AP2S1P53680 142 aaPredicted RBP12.21□□□□□ -0.45
NEK9-211ENST00000557673 ZNF345Q14585 488 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 MORN5Q5VZ52 161 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 LINC00305Q7Z4B0 112 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
NEK9-211ENST00000557673 GPR82Q96P67 336 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 MFFQ9GZY8 342 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
NEK9-211ENST00000557673 HMSDA8MTL9 139 aa12.2□□□□□ -0.46
NEK9-211ENST00000557673 GALR1P47211 349 aa12.2□□□□□ -0.46
NEK9-211ENST00000557673 GCSAMLQ5JQS6 135 aa12.2□□□□□ -0.46
NEK9-211ENST00000557673 AKAP14Q86UN6 197 aa12.2□□□□□ -0.46
NEK9-211ENST00000557673 GATAD1Q8WUU5 269 aa12.2□□□□□ -0.46
NEK9-211ENST00000557673 RNF24Q9Y225 148 aa12.2□□□□□ -0.46
NEK9-211ENST00000557673 SOCS3O14543 225 aa12.19□□□□□ -0.46
NEK9-211ENST00000557673 RPL7P18124 248 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms