RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PRR25Q96S07 402 aa11.47□□□□□ -0.57
NEDD1-213ENST00000557644 PSMG3Q9BT73 122 aaPredicted RBP11.47□□□□□ -0.57
NEDD1-213ENST00000557644 BOLA2-SMG1P6H3BVE0 249 aa11.46□□□□□ -0.57
NEDD1-213ENST00000557644 RAB2AP61019 212 aa11.46□□□□□ -0.57
NEDD1-213ENST00000557644 GNPNAT1Q96EK6 184 aaPredicted RBP11.46□□□□□ -0.57
NEDD1-213ENST00000557644 ZNF256Q9Y2P7 627 aaPredicted RBP11.46□□□□□ -0.57
NEDD1-213ENST00000557644 BOLA1Q9Y3E2 137 aa11.46□□□□□ -0.57
NEDD1-213ENST00000557644 GP9P14770 177 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 MIR17HGQ75NE6 70 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 STXBP6Q8NFX7 210 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 MS4A6AQ9H2W1 248 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 SMAD5-AS1Q9Y6J3 95 aa11.46□□□□□ -0.58
NEDD1-213ENST00000557644 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
NEDD1-213ENST00000557644 SNRPCP09234 159 aaKnown RBP11.45□□□□□ -0.58
NEDD1-213ENST00000557644 SPP1P10451 314 aa11.45□□□□□ -0.58
NEDD1-213ENST00000557644 M6PRP20645 277 aa11.45□□□□□ -0.58
NEDD1-213ENST00000557644 C17orf77Q96MU5 243 aa11.45□□□□□ -0.58
NEDD1-213ENST00000557644 MEGF8Q7Z7M0 2845 aa11.44□□□□□ -0.58
NEDD1-213ENST00000557644 HELTA6NFD8 242 aa11.44□□□□□ -0.58
NEDD1-213ENST00000557644 SERF2P84101 59 aa11.44□□□□□ -0.58
NEDD1-213ENST00000557644 ACOT6Q3I5F7 207 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-213ENST00000557644 SPAG8Q99932 426 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-213ENST00000557644 CD5P06127 495 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 CD7P09564 240 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 S100A7P31151 101 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 PLA2G2EQ9NZK7 142 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 DNASE2O00115 360 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-213ENST00000557644 MRPS12O15235 138 aaKnown RBP11.43□□□□□ -0.58
NEDD1-213ENST00000557644 RPP25LQ8N5L8 163 aaKnown RBP11.43□□□□□ -0.58
NEDD1-213ENST00000557644 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 SLC25A2Q9BXI2 301 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 RPRMQ9NS64 109 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 FUT9Q9Y231 359 aa11.43□□□□□ -0.58
NEDD1-213ENST00000557644 TPT1P13693 172 aaKnown RBP11.42□□□□□ -0.58
NEDD1-213ENST00000557644 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
NEDD1-213ENST00000557644 GALR1P47211 349 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 FAM122CQ6P4D5 195 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 FAM167A-AS1Q96KT0 104 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
NEDD1-213ENST00000557644 PAFAH1B2P68402 229 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 TMED6Q8WW62 240 aa11.42□□□□□ -0.58
NEDD1-213ENST00000557644 AURKAIP1Q9NWT8 199 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-213ENST00000557644 H3BTX0 84 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 PYYP10082 97 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 RHOBP62745 196 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 SLC51BQ86UW2 128 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 BPIFA4PQ86YQ2 179 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 GPR82Q96P67 336 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 MRPL32Q9BYC8 188 aaKnown RBP11.41□□□□□ -0.58
NEDD1-213ENST00000557644 WFDC10AQ9H1F0 79 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 K7EQG2 157 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 CD81P60033 236 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 ZMAT5Q9UDW3 170 aaKnown RBP11.41□□□□□ -0.58
NEDD1-213ENST00000557644 UBQLN2Q9UHD9 624 aa11.41□□□□□ -0.58
NEDD1-213ENST00000557644 A0A1W2PPV4 95 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 OR4C46A6NHA9 309 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 H3BQ15 152 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 SEC11BP0C7V7 166 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 EIF5AP63241 154 aaKnown RBP11.4□□□□□ -0.58
NEDD1-213ENST00000557644 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 SSX7Q7RTT5 188 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 MBP02144 154 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 ATF4P18848 351 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-213ENST00000557644 FHITP49789 147 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 Q8N1Y9 231 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 ZNF503Q96F45 646 aa11.4□□□□□ -0.58
NEDD1-213ENST00000557644 SOCS3O14543 225 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 ZNF688P0C7X2 276 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
NEDD1-213ENST00000557644 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 ODF3L2Q3SX64 289 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 RNF24Q9Y225 148 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 OR7C2O60412 319 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 OR10J4P0C629 311 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 C4BPBP20851 252 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 ZNF586Q9NXT0 402 aa11.39□□□□□ -0.59
NEDD1-213ENST00000557644 ZNF124Q15973 351 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 OR51M1Q9H341 326 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 TMEM14CQ9P0S9 112 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 K7EIL1 84 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 SLC17A3O00476 420 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms