RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 IFITM1P13164 125 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ATP5G3P48201 142 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 POLR2JP52435 117 aaKnown RBP1.11□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM258P61165 79 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 AKR1C1Q04828 323 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 CLEC12AQ5QGZ9 265 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF684Q5T5D7 378 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 SHISA6Q6ZSJ9 500 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 COMMD6Q7Z4G1 85 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 TRAPPC6BQ86SZ2 158 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 SLC22A24Q8N4F4 322 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 C15orf56Q8N910 161 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF502Q8TBZ5 544 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 SCGB3A2Q96PL1 93 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 GPER1Q99527 375 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 AICDAQ9GZX7 198 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 SMDT1Q9H4I9 107 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 HHLA3Q9XRX5 114 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF236Q9UL36 1845 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 COL18A1P39060 1754 aa1.11□□□□□ -2.23
HIF1A-212ENST00000557538 MUC21A0A0G2JKD1 596 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 FAM240AA0A1B0GVK7 77 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM235A6NFC5 223 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF705GA8MUZ8 300 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 H0Y9J4 135 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 PIRO00625 290 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 LSM8O95777 96 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 AKAIN1P0CW23 69 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 RPL22P35268 128 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 MYCNOSP40205 109 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 NDUFA8P51970 172 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 TPPP2P59282 170 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 TAS2R46P59540 309 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 TAS2R19P59542 299 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 PRDX1Q06830 199 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF880Q6PDB4 577 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 LCN15Q6UWW0 184 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 PHF5AQ7RTV0 110 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 MSRB3Q8IXL7 192 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 PPTC7Q8NI37 304 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 CT55Q8WUE5 264 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 C15orf40Q8WUR7 153 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 GPX7Q96SL4 187 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SHANK2-AS3Q9BTD1 123 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 PARP12Q9H0J9 701 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SLC25A22Q9H936 323 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 AMMECR1Q9Y4X0 333 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 MCM3APO60318 1980 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SCN10AQ9Y5Y9 1956 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 COL1A1P02452 1464 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 NHSQ6T4R5 1651 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 A0A1B0GV50 99 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 DAPL1A0PJW8 107 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF860A6NHJ4 632 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SNRPGP15A8MWD9 76 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 C12orf77C9JDV5 145 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 H3BMG7 143 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SYS1-DBNDD2H3BUS1 97 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 K7EM74 188 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 GEMIN2O14893 280 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF861PO60384 105 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 KRTAP5-8O75690 187 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 IL5P05113 134 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SLC25A5P05141 298 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 COX7A1P24310 79 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 RSPO1Q2MKA7 263 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SPANXN3Q5MJ09 141 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 GTF2H5Q6ZYL4 71 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 VN1R4Q7Z5H5 301 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 LRP11Q86VZ4 500 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 RPP25LQ8N5L8 163 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 Q8N7P7 452 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 OR5D14Q8NGL3 314 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 OR2T35Q8NGX2 323 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 STAG3L4Q8TBR4 150 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF721Q8TF20 911 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 CCL17Q92583 94 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 KLK6Q92876 244 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 COMMD5Q9GZQ3 224 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 AGPAT4-IT1Q9H0P7 198 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 GABARAPL1Q9H0R8 117 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ST20Q9HBF5 79 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 TRMT112Q9UI30 125 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SOX21Q9Y651 276 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 MYO18AQ92614 2054 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SCN9AQ15858 1988 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 GREB1Q4ZG55 1949 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 MGAMO43451 1857 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 RALGAPA2Q2PPJ7 1873 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 MUC21A0A140T8X8 626 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 UQCRQO14949 82 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 GSTZ1O43708 216 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ZNF737O75373 536 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 IGHV4-34P06331 123 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 NTF3P20783 257 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 INPP1P49441 399 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 HINT1P49773 126 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 ARFRP1Q13795 201 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 KIAA0087Q14695 138 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 FKBP1CQ5VVH2 108 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms