RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MT-ND4LP03901 98 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 ELANEP08246 267 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 RPL35P42766 123 aaKnown RBP9.64□□□□□ -0.87
SHMT2-233ENST00000557529 FOXE3Q13461 319 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 PDE6HQ13956 83 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 LYPD1Q8N2G4 141 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 C5orf17Q8NAS9 161 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 C2CD4CQ8TF44 421 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 GPR82Q96P67 336 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 METTL26Q96S19 204 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 OTORQ9NRC9 128 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 ZNF586Q9NXT0 402 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 PGPA6NDG6 321 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 PPP5D1E7EU14 171 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 PEX7O00628 323 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 TSPAN4O14817 238 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 SLC25A5P05141 298 aaKnown RBP9.63□□□□□ -0.87
SHMT2-233ENST00000557529 CNN1P51911 297 aaKnown RBP9.63□□□□□ -0.87
SHMT2-233ENST00000557529 TAS2R60P59551 318 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 LINC01551Q86U37 167 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 OR8I2Q8N0Y5 310 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 Q9H3A6 140 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 TMEM242Q9NWH2 141 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 CLDN34H7C241 214 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 GGCTO75223 188 aaKnown RBP9.63□□□□□ -0.87
SHMT2-233ENST00000557529 IGHV3-11P01762 117 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
SHMT2-233ENST00000557529 GNG4P50150 75 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 C15orf54Q8N8G6 183 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 DUX5Q96PT3 197 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
SHMT2-233ENST00000557529 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
SHMT2-233ENST00000557529 TRBV20OR9-2A0A075B6H5 130 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 CLPSL1A2RUU4 121 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 H3BTX0 84 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 BUB3O43684 328 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 ZNF253O75346 499 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 SNRPCP09234 159 aaKnown RBP9.62□□□□□ -0.87
SHMT2-233ENST00000557529 CD99P14209 185 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
SHMT2-233ENST00000557529 PSG9Q00887 426 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 RNF212Q495C1 297 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 RNF152Q8N8N0 203 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 CMTM2Q8TAZ6 248 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 ANAPC16Q96DE5 110 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 CDC42EP3Q9UKI2 254 aa9.62□□□□□ -0.87
SHMT2-233ENST00000557529 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 PPP1R2P9O14990 202 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-233ENST00000557529 GALR1P47211 349 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 MYOZ3Q8TDC0 251 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 ZNF418Q8TF45 676 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-233ENST00000557529 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 AAMDCQ9H7C9 122 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 SERTAD4Q9NUC0 356 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 U3KQE9 123 aa9.61□□□□□ -0.87
SHMT2-233ENST00000557529 CELSR1Q9NYQ6 3014 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 A0A087X0K7 114 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 FAM181BA6NEQ2 426 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 H7BYZ3 331 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 TCRAP04437 139 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 SRD5A1P18405 259 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 MEOX2P50222 304 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 UBE2G1P62253 170 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 OCC1Q8TAD7 63 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 KLF12Q9Y4X4 402 aa9.6□□□□□ -0.87
SHMT2-233ENST00000557529 COLCA2A8K830 154 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 K7EQM0 130 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 LY6G6DO95868 133 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.87
SHMT2-233ENST00000557529 CRYBA1P05813 215 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 LGALS1P09382 135 aaKnown RBP9.59□□□□□ -0.87
SHMT2-233ENST00000557529 FOSL1P15407 271 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 GNG5P63218 68 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 C10orf99Q6UWK7 81 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 GPHB5Q86YW7 130 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 EXOC3-AS1Q8N2X6 119 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 ARL6IP6Q8N6S5 226 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 FMC1Q96HJ9 113 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 IGF2BP2-AS1Q96M15 143 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 C17orf77Q96MU5 243 aa9.59□□□□□ -0.87
SHMT2-233ENST00000557529 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
SHMT2-233ENST00000557529 NBPF19A0A087WUL8 3843 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 SERTM2A0A1B0GWG4 89 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 A0A1W2PS18 150 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms