RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 G3V3Q6 166 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 K7ERU9 68 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 IGLV1-51P01701 117 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 APOC1P02654 83 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 MGST1P10620 155 aaKnown RBP1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 PEBP1P30086 187 aaKnown RBP1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 FXYD2P54710 66 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 NDUFA6P56556 154 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 SS18Q15532 418 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 RNASE10Q5GAN6 216 aaKnown RBP1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 AAED1Q7RTV5 226 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 C9orf163Q8N9P6 203 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 PRELID3AQ96N28 172 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 C20orf166-AS1Q96NR2 134 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 CALML5Q9NZT1 146 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 CCL26Q9Y258 94 aa1.69□□□□□ -2.14
HMGB1P14-201ENST00000557424 SHANK1Q9Y566 2161 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 FAM135BQ49AJ0 1406 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 IGHV3-64A0A075B6Q5 118 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 SDHAF1A6NFY7 115 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 F8W036 122 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 SDCBPO00560 298 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 PSCAO43653 123 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 S100A1P23297 94 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 NFYAP23511 347 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 HINT1P49773 126 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 KLRD1Q13241 179 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 ZNF345Q14585 488 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 CDK5R1Q15078 307 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 HSD17B12Q53GQ0 312 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 MORN4Q8NDC4 146 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 OR4X2Q8NGF9 303 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 DIRC1Q969H9 104 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 CHCHD1Q96BP2 118 aaKnown RBP1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 GGACTQ9BVM4 153 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 LINC00470Q9BZP3 86 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 NYNRINQ9P2P1 1898 aaKnown RBP1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 SCN9AQ15858 1988 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 ARHGEF28Q8N1W1 1705 aaKnown RBP1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 PRR14LQ5THK1 2151 aa1.68□□□□□ -2.14
HMGB1P14-201ENST00000557424 N4BP2Q86UW6 1770 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 MYH11P35749 1972 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 LOC100130705A0A1B0GUX0 176 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 C7orf71A4D174 169 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 HMSDA8MTL9 139 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 IBA57-AS1B1ANH7 110 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 ATP6V1G2-DDX39BF2Z307 99 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 FNDC10F2Z333 226 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 NPFFO15130 113 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 PMP2P02689 132 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 ZNF705BP0CI00 300 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 COX6A1P12074 109 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 ROMO1P60602 79 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 NCS1P62166 190 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 ZNF90Q03938 601 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 ESRGQ1W209 222 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 DEFB113Q30KQ7 82 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 CCSMST1Q4G0I0 132 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 PABPC1L2AQ5JQF8 200 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 C1orf134Q5TEV5 83 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 Q8N814 137 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 OR5A2Q8NGI9 324 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 OR5D16Q8NGK9 328 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 POP5Q969H6 163 aaKnown RBP1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 RTL9Q8NET4 1388 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 FRMPD1Q5SYB0 1578 aa1.67□□□□□ -2.14
HMGB1P14-201ENST00000557424 RIC1Q4ADV7 1423 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 CUL9Q8IWT3 2517 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 IGKV1D-17A0A075B6S4 117 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 A0A0G2JQZ4 141 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 MIF4GDA9UHW6 222 aaKnown RBP1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 OR1I1O60431 355 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 ZNF737O75373 536 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 TSPAN19P0C672 248 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 ASAH2BP0C7U1 165 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 ZNF25P17030 456 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 FUSP35637 526 aaKnown RBP eCLIP1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 AKR1D1P51857 326 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 TMEM258P61165 79 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 MAXP61244 160 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 SNRPD3P62318 126 aaKnown RBP1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 MYL5Q02045 173 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 NDUFA5Q16718 116 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 PRR9Q5T870 116 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 IGFL1Q6UW32 110 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 CTAGE3PQ8IX95 158 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 FAM216BQ8N7L0 139 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 ARL11Q969Q4 196 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 PRO2289Q9P1D8 64 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 COMMD3Q9UBI1 195 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 TCOF1Q13428 1488 aaKnown RBP1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 NUP210LQ5VU65 1888 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 MALRD1Q5VYJ5 2156 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 HEATR5AQ86XA9 2040 aa1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 PRG4Q92954 1404 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P14-201ENST00000557424 SCN8AQ9UQD0 1980 aa1.65□□□□□ -2.14
HMGB1P14-201ENST00000557424 NUP210Q8TEM1 1887 aaPredicted RBP1.65□□□□□ -2.14
HMGB1P14-201ENST00000557424 ADGBQ8N7X0 1667 aa1.65□□□□□ -2.15
HMGB1P14-201ENST00000557424 IGKV3D-11A0A0A0MRZ8 115 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms