RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 HYPMO75409 117 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 CA1P00915 261 aaPredicted RBP10.2□□□□□ -0.78
VPS33B-206ENST00000557358 SPP1P10451 314 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 SULT1A1P50225 295 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 BAXQ07812 192 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 ZNF124Q15973 351 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 ACTL10Q5JWF8 245 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 HUWE1Q7Z6Z7 4374 aaKnown RBP10.2□□□□□ -0.78
VPS33B-206ENST00000557358 RNF183Q96D59 192 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 SLC25A22Q9H936 323 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 BOLA2-SMG1P6H3BVE0 249 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 OR5G3P0C626 314 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 LINC00869P0C866 280 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 ZNF345Q14585 488 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 PXDC1Q5TGL8 231 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 LINC00052Q96N35 136 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 MFFQ9GZY8 342 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
VPS33B-206ENST00000557358 ZNF98A6NK75 572 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 PMS2P5A8MQ11 134 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 CST7O76096 145 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 ATF4P18848 351 aaPredicted RBP10.18□□□□□ -0.78
VPS33B-206ENST00000557358 S100A11P31949 105 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 PSMB3P49720 205 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 SLC38A11Q08AI6 406 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 ZFAND6Q6FIF0 208 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 FAM24BQ8N5W8 94 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 C1QTNF4Q9BXJ3 329 aa10.18□□□□□ -0.78
VPS33B-206ENST00000557358 ISLRO14498 428 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 RPL7P18124 248 aaKnown RBP10.17□□□□□ -0.78
VPS33B-206ENST00000557358 GATA2P23769 480 aaPredicted RBP10.17□□□□□ -0.78
VPS33B-206ENST00000557358 NHLH2Q02577 135 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 ARL16Q0P5N6 197 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 Q6ZRG5 221 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 OR5C1Q8NGR4 320 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 C16orf92Q96LL3 132 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 RARRES2Q99969 163 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 UQCC1Q9NVA1 299 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 DOK5Q9P104 306 aa10.17□□□□□ -0.78
VPS33B-206ENST00000557358 AGRNO00468 2067 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 A0A0D9SG52 128 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 CXCL2P19875 107 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 NKX2-5P52952 324 aaPredicted RBP10.16□□□□□ -0.78
VPS33B-206ENST00000557358 PLP1P60201 277 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 ATP6V1FQ16864 119 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 SPATA31B1PQ5VZV4 182 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 EBLN2Q6P2I7 272 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 TRPT1Q86TN4 253 aaKnown RBP10.16□□□□□ -0.78
VPS33B-206ENST00000557358 C9orf62Q8N4C0 152 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 KCNRGQ8N5I3 272 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 OR11H2Q8NH07 326 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 LRRC20Q8TCA0 184 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 RSG1Q9BU20 258 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 SLC25A39Q9BZJ4 359 aaPredicted RBP10.16□□□□□ -0.78
VPS33B-206ENST00000557358 ARL6Q9H0F7 186 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 RPRMQ9NS64 109 aa10.16□□□□□ -0.78
VPS33B-206ENST00000557358 ELOA3CA0A087WX78 387 aaPredicted RBP10.15□□□□□ -0.78
VPS33B-206ENST00000557358 AGPAT2O15120 278 aa10.15□□□□□ -0.78
VPS33B-206ENST00000557358 COX7A2P2O60397 106 aa10.15□□□□□ -0.78
VPS33B-206ENST00000557358 CAMLGP49069 296 aa10.15□□□□□ -0.78
VPS33B-206ENST00000557358 SHANK2-AS3Q9BTD1 123 aa10.15□□□□□ -0.78
VPS33B-206ENST00000557358 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
VPS33B-206ENST00000557358 SLC25A32Q9H2D1 315 aa10.15□□□□□ -0.78
VPS33B-206ENST00000557358 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 CLINT1Q14677 625 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 LGALSLQ3ZCW2 172 aaPredicted RBP10.14□□□□□ -0.79
VPS33B-206ENST00000557358 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 TMUB2Q71RG4 321 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 OR1L4Q8NGR5 311 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 ATP5SQ99766 215 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 ARPC5LQ9BPX5 153 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 ARV1Q9H2C2 271 aa10.14□□□□□ -0.79
VPS33B-206ENST00000557358 KANTRA0A1W2PQU2 76 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 CXorf65A6NEN9 183 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 H3BRN7 92 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 TAAR5O14804 337 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 BCL2L11O43521 198 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 MPDU1O75352 247 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 HLA-DRB4P13762 266 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 VWC2Q2TAL6 325 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 TMEM182Q6ZP80 229 aaPredicted RBP10.13□□□□□ -0.79
VPS33B-206ENST00000557358 PFDN5Q99471 154 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 SCRT1Q9BWW7 348 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 HLA-DRB4X5D2U9 266 aa10.13□□□□□ -0.79
VPS33B-206ENST00000557358 UBE2L5PA0A1B0GUS4 154 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 H3BMM0 161 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 C4BPBP20851 252 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 ZNF266Q14584 549 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 C10orf113Q5VZT2 155 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 LINC00305Q7Z4B0 112 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 OR4B1Q8NGF8 309 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 SAV1Q9H4B6 383 aaPredicted RBP10.12□□□□□ -0.79
VPS33B-206ENST00000557358 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
VPS33B-206ENST00000557358 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
VPS33B-206ENST00000557358 JTBO76095 146 aa10.11□□□□□ -0.79
VPS33B-206ENST00000557358 IFNA5P01569 189 aa10.11□□□□□ -0.79
VPS33B-206ENST00000557358 MIFP14174 115 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms