RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR5AC2Q9NZP5 309 aa9.2□□□□□ -0.94
SLIRP-209ENST00000557342 AGRNO00468 2067 aa9.2□□□□□ -0.94
SLIRP-209ENST00000557342 ELOA3CA0A087WX78 387 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-209ENST00000557342 UBE2L5PA0A1B0GUS4 154 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 H0YIZ8 118 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 C3orf84H3BNL1 204 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 ISLRO14498 428 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 COX7A2P2O60397 106 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 MPC2O95563 127 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 SPP1P10451 314 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 NHLH2Q02577 135 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 DEFB135Q30KP9 77 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 ACTL10Q5JWF8 245 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
SLIRP-209ENST00000557342 TRPT1Q86TN4 253 aaKnown RBP9.19□□□□□ -0.94
SLIRP-209ENST00000557342 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 RNF183Q96D59 192 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 RSG1Q9BU20 258 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 SCRT1Q9BWW7 348 aa9.19□□□□□ -0.94
SLIRP-209ENST00000557342 HUWE1Q7Z6Z7 4374 aaKnown RBP9.19□□□□□ -0.94
SLIRP-209ENST00000557342 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 SOCS3O14543 225 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 CA1P00915 261 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-209ENST00000557342 ATF4P18848 351 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-209ENST00000557342 FGF7P21781 194 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 RPL29P47914 159 aaKnown RBP9.18□□□□□ -0.94
SLIRP-209ENST00000557342 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 LINC00305Q7Z4B0 112 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 OR5C1Q8NGR4 320 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 LINC00052Q96N35 136 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 PFDN5Q99471 154 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
SLIRP-209ENST00000557342 B2MP61769 119 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 NUTF2P61970 127 aaKnown RBP9.17□□□□□ -0.94
SLIRP-209ENST00000557342 PRR20EP86478 221 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 PRR20CP86479 221 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 PRR20DP86480 221 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 PRR20BP86481 221 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 PRR20AP86496 221 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 CD300CQ08708 224 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 OPCMLQ14982 345 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 C10orf113Q5VZT2 155 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 MIC13Q5XKP0 118 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 DNAJC4Q9NNZ3 241 aa9.17□□□□□ -0.94
SLIRP-209ENST00000557342 G3V3Q6 166 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 HLA-DRB4P13762 266 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 SPATA31B1PQ5VZV4 182 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 THAP6Q8TBB0 222 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 TMEM37Q8WXS4 190 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 RPRMQ9NS64 109 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 HLA-DRB4X5D2U9 266 aa9.16□□□□□ -0.94
SLIRP-209ENST00000557342 A0A087X0K7 114 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 H3BMM0 161 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 C1QBP02746 253 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 LYL1P12980 280 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 RPL12P30050 165 aaKnown RBP9.15□□□□□ -0.94
SLIRP-209ENST00000557342 FGL1Q08830 312 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 CLINT1Q14677 625 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 EBLN2Q6P2I7 272 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 C1QTNF4Q9BXJ3 329 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 NPCDR1Q9BY65 106 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 SAV1Q9H4B6 383 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-209ENST00000557342 KCNIP2Q9NS61 270 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 HSPB11Q9Y547 144 aa9.15□□□□□ -0.94
SLIRP-209ENST00000557342 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 CXCL2P19875 107 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 ZNF709Q8N972 641 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 LRRC20Q8TCA0 184 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 ATP5SQ99766 215 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 RARRES2Q99969 163 aa9.14□□□□□ -0.95
SLIRP-209ENST00000557342 WDR61Q9GZS3 305 aaKnown RBP9.14□□□□□ -0.95
SLIRP-209ENST00000557342 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 IFNA5P01569 189 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 ZFP69Q49AA0 526 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 OR11H2Q8NH07 326 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 SCGB1C1Q8TD33 95 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 C17orf77Q96MU5 243 aa9.13□□□□□ -0.95
SLIRP-209ENST00000557342 A0A0J9YWU9 116 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 MRPS12O15235 138 aaKnown RBP9.12□□□□□ -0.95
SLIRP-209ENST00000557342 GIG44P09565 113 aaPredicted RBP9.12□□□□□ -0.95
SLIRP-209ENST00000557342 C4BPBP20851 252 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 Q5BKY6 102 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms