RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 ARL6Q9H0F7 186 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 NPVFQ9HCQ7 196 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 UQCC1Q9NVA1 299 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
SYNE2-224ENST00000557024 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
SYNE2-224ENST00000557024 HSPG2P98160 4391 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 TRAV30A0A087WSZ9 112 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 UBE2L5PA0A1B0GUS4 154 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 ZFP92A6NM28 416 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 PMS2P5A8MQ11 134 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 I3L2K1 104 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 K7EIM0 57 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 TAAR5O14804 337 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 EIF5AP63241 154 aaKnown RBP6.8□□□□□ -1.32
SYNE2-224ENST00000557024 ARL16Q0P5N6 197 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 RAB31Q13636 194 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 ZNF266Q14584 549 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 ZNF345Q14585 488 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 PVRIGQ6DKI7 326 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 TMUB2Q71RG4 321 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 MAPKAPK5-AS1Q8N8E1 139 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 TMEM170AQ8WVE7 144 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 PPP1R14BQ96C90 147 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 TXN2Q99757 166 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 ATP5SQ99766 215 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 ARPC5LQ9BPX5 153 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 FNDC4Q9H6D8 234 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-224ENST00000557024 DNAH11Q96DT5 4516 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 PKD1P98161 4303 aa6.8□□□□□ -1.32
SYNE2-224ENST00000557024 IGHV4-4A0A075B6R2 117 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 IGHV3-35A0A0C4DH35 117 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 RNF222A6NCQ9 220 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 MFSD2BA6NFX1 497 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 FNDC10F2Z333 226 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 NUPL2O15504 423 aaKnown RBP6.79□□□□□ -1.32
SYNE2-224ENST00000557024 CLN5O75503 358 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 FABP1P07148 127 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 C8orf88P0DMB2 117 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 GPR183P32249 361 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 NKX2-5P52952 324 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-224ENST00000557024 GAMTQ14353 236 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 ZNF124Q15973 351 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 KLK9Q2XQG4 91 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 TMEM144Q7Z5S9 345 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 APRG1Q8IVJ8 170 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 KCNRGQ8N5I3 272 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 ZNF709Q8N972 641 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 OR4X1Q8NH49 305 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 MARC2Q969Z3 335 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 ZNF471Q9BX82 626 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-224ENST00000557024 CSTL1Q9H114 145 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 KLK9Q9UKQ9 250 aa6.79□□□□□ -1.32
SYNE2-224ENST00000557024 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 OR2T8A6NH00 312 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 C11orf94C9JXX5 98 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 PRSS46E5RG02 174 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 C17orf112F2Z3M2 114 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 BOLA2-SMG1P6H3BVE0 249 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 TSPAN4O14817 238 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 CLEC3BP05452 202 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 CXCL2P19875 107 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 FGF7P21781 194 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 OR10J1P30954 320 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 OPCMLQ14982 345 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 LGALSLQ3ZCW2 172 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-224ENST00000557024 SPSB3Q6PJ21 355 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 TMEM116Q8NCL8 245 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 ZNF502Q8TBZ5 544 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 BSCL2Q96G97 398 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-224ENST00000557024 ATP6V0BQ99437 205 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 MRPL27Q9P0M9 148 aaKnown RBP6.78□□□□□ -1.32
SYNE2-224ENST00000557024 HERC1Q15751 4861 aa6.78□□□□□ -1.32
SYNE2-224ENST00000557024 OR4C46A6NHA9 309 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 PAX4O43316 350 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 TGOLN2O43493 480 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 BCL2L11O43521 198 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 MPDU1O75352 247 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 RELQ04864 619 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-224ENST00000557024 TIGITQ495A1 244 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 POM121L12Q8N7R1 296 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 Q8WTZ3 238 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 TRGV9Q99603 122 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 UFC1Q9Y3C8 167 aa6.77□□□□□ -1.33
SYNE2-224ENST00000557024 AGPAT2O15120 278 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 YIF1AO95070 293 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 CA1P00915 261 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-224ENST00000557024 TPT1P13693 172 aaKnown RBP6.76□□□□□ -1.33
SYNE2-224ENST00000557024 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 CAMLGP49069 296 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 ELLP55199 621 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-224ENST00000557024 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 RPL7L1Q6DKI1 246 aaKnown RBP6.76□□□□□ -1.33
SYNE2-224ENST00000557024 LAMTOR1Q6IAA8 161 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 CYP2G1PQ6ZSU1 146 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 Q6ZTC4 211 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 C9orf62Q8N4C0 152 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 THAP8Q8NA92 274 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 HSD17B11Q8NBQ5 300 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms