RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SPANXN5Q5MJ07 72 aa10.39□□□□□ -0.75
CHD8-211ENST00000556833 TMEM147Q9BVK8 224 aa10.39□□□□□ -0.75
CHD8-211ENST00000556833 PITX3O75364 302 aa10.38□□□□□ -0.75
CHD8-211ENST00000556833 HOXB5P09067 269 aa10.38□□□□□ -0.75
CHD8-211ENST00000556833 SRPXP78539 464 aa10.38□□□□□ -0.75
CHD8-211ENST00000556833 HIST1H1AQ02539 215 aaPredicted RBP10.38□□□□□ -0.75
CHD8-211ENST00000556833 ACOT7LQ6ZUV0 252 aa10.38□□□□□ -0.75
CHD8-211ENST00000556833 C15orf53Q8NAA6 179 aa10.38□□□□□ -0.75
CHD8-211ENST00000556833 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
CHD8-211ENST00000556833 NBDYA0A0U1RRE5 68 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 A8MTW9 85 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 SNRPCP09234 159 aaKnown RBP10.37□□□□□ -0.75
CHD8-211ENST00000556833 RHOBP62745 196 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 GGNBP1Q5YKI7 109 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 DYNC2LI1Q8TCX1 351 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 LINC01587Q99440 93 aa10.37□□□□□ -0.75
CHD8-211ENST00000556833 MRPS26Q9BYN8 205 aaKnown RBP10.37□□□□□ -0.75
CHD8-211ENST00000556833 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 PRSS46E5RG02 174 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 BOLA2-SMG1P6H3BVE0 249 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
CHD8-211ENST00000556833 ALDH3B2P48448 385 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
CHD8-211ENST00000556833 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 UHRF2Q96PU4 802 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 PPP1R14DQ9NXH3 145 aa10.36□□□□□ -0.75
CHD8-211ENST00000556833 CCDC59Q9P031 241 aaKnown RBP10.36□□□□□ -0.75
CHD8-211ENST00000556833 RSL24D1Q9UHA3 163 aaKnown RBP10.36□□□□□ -0.75
CHD8-211ENST00000556833 LRP1BQ9NZR2 4599 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 FABP12A6NFH5 140 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 H3BRN7 92 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 SYNGR2O43760 224 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 MED6O75586 246 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 TNFSF8P32971 234 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 RRAS2P62070 204 aaPredicted RBP10.35□□□□□ -0.75
CHD8-211ENST00000556833 PPP1R1AQ13522 171 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 RNF141Q8WVD5 230 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 PARD6GQ9BYG4 376 aaPredicted RBP10.35□□□□□ -0.75
CHD8-211ENST00000556833 LINC00588Q9Y4M8 146 aa10.35□□□□□ -0.75
CHD8-211ENST00000556833 CCNKO75909 580 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 ATP5G1P05496 136 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 OR5G3P0C626 314 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 ATP5G3P48201 142 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 CLINT1Q14677 625 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 PYDC2Q56P42 97 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 CYP2G1PQ6ZSU1 146 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
CHD8-211ENST00000556833 DUXBA0A1W2PPF3 345 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 CFDP00746 253 aaPredicted RBP10.33□□□□□ -0.76
CHD8-211ENST00000556833 IL5P05113 134 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 LINC00869P0C866 280 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 CCL18P55774 89 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 RPP30P78346 268 aaKnown RBP10.33□□□□□ -0.76
CHD8-211ENST00000556833 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 TMEM128Q5BJH2 165 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 SPATA12Q7Z6I5 190 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 MCFD2Q8NI22 146 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 LRRC20Q8TCA0 184 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 CIB3Q96Q77 187 aaPredicted RBP10.33□□□□□ -0.76
CHD8-211ENST00000556833 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
CHD8-211ENST00000556833 SLC45A2Q9UMX9 530 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 RABL2BQ9UNT1 228 aa10.33□□□□□ -0.76
CHD8-211ENST00000556833 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
CHD8-211ENST00000556833 A0A0J9YY99 117 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 H3BTX0 84 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 J3KRW8 73 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 ADAP1O75689 374 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 SFT2D2O95562 160 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 FAUP35544 74 aaKnown RBP10.32□□□□□ -0.76
CHD8-211ENST00000556833 FAM3BP58499 235 aaPredicted RBP10.32□□□□□ -0.76
CHD8-211ENST00000556833 RAP2BP61225 183 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 POLR2GP62487 172 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD8-211ENST00000556833 DLK1P80370 383 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 OR5I1Q13606 314 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 TOMM5Q8N4H5 51 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 OR8A1Q8NGG7 326 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 TRIM63Q969Q1 353 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 GPR82Q96P67 336 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 SHANK2-AS3Q9BTD1 123 aa10.32□□□□□ -0.76
CHD8-211ENST00000556833 SLIRPQ9GZT3 109 aaKnown RBP10.32□□□□□ -0.76
CHD8-211ENST00000556833 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
CHD8-211ENST00000556833 SSSCA1O60232 199 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 HYPMO75409 117 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 SLC25A6P12236 298 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 CXCL3P19876 107 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 TSPOP30536 169 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 RAB2BQ8WUD1 216 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 SOSTQ9BQB4 213 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
CHD8-211ENST00000556833 CBY3A6NI87 242 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 H3BMQ9 156 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 RPL7P18124 248 aaKnown RBP10.3□□□□□ -0.76
CHD8-211ENST00000556833 SLC38A11Q08AI6 406 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms