RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-242ENST00000556644 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 RASL11BQ9BPW5 248 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 SRSF8Q9BRL6 282 aaKnown RBP3.11□□□□□ -1.91
ATXN3-242ENST00000556644 C20orf24Q9BUV8 137 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 PARP12Q9H0J9 701 aaKnown RBP3.11□□□□□ -1.91
ATXN3-242ENST00000556644 OR6C3Q9NZP0 311 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 CACNG5Q9UF02 275 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 TRAPPC2LQ9UL33 140 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 TP53TG1Q9Y2A0 90 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 RBM7Q9Y580 266 aaKnown RBP3.11□□□□□ -1.91
ATXN3-242ENST00000556644 LY96Q9Y6Y9 160 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
ATXN3-242ENST00000556644 TRAV41A0A0B4J266 112 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 A0A1W2PN81 502 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 CEBPZOSA8MTT3 80 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 FAM229AH3BQW9 127 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 H7BYZ3 331 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 SLC33A1O00400 549 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-242ENST00000556644 GGCTO75223 188 aaKnown RBP3.1□□□□□ -1.91
ATXN3-242ENST00000556644 GAS8-AS1O95177 125 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR2H2O95918 312 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 MT-CO2P00403 227 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 HPRT1P00492 218 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 HRASP01112 189 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 IGKV1-39P01597 117 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 IGKV1-5P01602 117 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 IGLV2-14P01704 120 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 IGKV1D-39P04432 117 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 CXCL1P09341 107 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 RPL35AP18077 110 aaKnown RBP3.1□□□□□ -1.91
ATXN3-242ENST00000556644 GZMHP20718 246 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 EDN2P20800 178 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 CHRNA7P36544 502 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 AKR1C3P42330 323 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 EIF4EBP1Q13541 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-242ENST00000556644 RTL8BQ17RB0 113 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 SMIM21Q3B7S5 101 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 FAM209BQ5JX69 171 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 Q6ZTC4 211 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 Q6ZWC4 215 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 MOB3BQ86TA1 216 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR51G1Q8NGK1 321 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 OR2T10Q8NGZ9 312 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 TMEM170AQ8WVE7 144 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 LEAP2Q969E1 77 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 TMEM18Q96B42 140 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 MS4A10Q96PG2 267 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 S1PR3Q99500 378 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 SMIM7Q9BQ49 75 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 ABHD14AQ9BUJ0 271 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 ZNF581Q9P0T4 197 aa3.1□□□□□ -1.91
ATXN3-242ENST00000556644 DSCAML1Q8TD84 2053 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 TRBV9A0A0B4J1U6 114 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 A0A0G2JRQ6 117 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 hADV38S2A0JD32 116 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 ZFP92A6NM28 416 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 IFITM10A6NMD0 228 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 PMS2P5A8MQ11 134 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 OOSP1A8MZH6 123 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 C11orf94C9JXX5 98 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 BMPR1BO00238 502 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 SPINT2O43291 252 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 YIF1AO95070 293 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 HAND1O96004 215 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 AREGP15514 252 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 HLA-DMBP28068 263 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 CD1BP29016 333 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 OPRK1P41145 380 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 GALR1P47211 349 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 RAB7AP51149 207 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 APOC4P55056 127 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 TPPP2P59282 170 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 SPCS3P61009 180 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
ATXN3-242ENST00000556644 PAFAH1B2P68402 229 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 MEF2CQ06413 473 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-242ENST00000556644 RAB31Q13636 194 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 KLF5Q13887 457 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-242ENST00000556644 ZNF726P1Q15940 193 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 SPANXN5Q5MJ07 72 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 LCN15Q6UWW0 184 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 H2BFWTQ7Z2G1 175 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 C6orf223Q8N319 242 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 Q8N6K4 173 aa3.09□□□□□ -1.91
ATXN3-242ENST00000556644 STPG3Q8N7X2 389 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms