RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 OXA1LQ15070 435 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 DEFB135Q30KP9 77 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 LINC00305Q7Z4B0 112 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 KIR2DL5AQ8N109 375 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 KIR2DL5BQ8NHK3 375 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 C16orf92Q96LL3 132 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 SMIM3Q9BZL3 60 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 DNAJC4Q9NNZ3 241 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
PSEN1-217ENST00000556533 HUWE1Q7Z6Z7 4374 aaKnown RBP12.59□□□□□ -0.39
PSEN1-217ENST00000556533 SPRY2O43597 315 aa12.58□□□□□ -0.4
PSEN1-217ENST00000556533 TMEM37Q8WXS4 190 aa12.58□□□□□ -0.4
PSEN1-217ENST00000556533 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
PSEN1-217ENST00000556533 SEPSECSQ9HD40 501 aaKnown RBP12.58□□□□□ -0.4
PSEN1-217ENST00000556533 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
PSEN1-217ENST00000556533 PXMP4Q9Y6I8 212 aa12.58□□□□□ -0.4
PSEN1-217ENST00000556533 ELOA3CA0A087WX78 387 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-217ENST00000556533 MPDU1O75352 247 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 CA1P00915 261 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-217ENST00000556533 RPL7P18124 248 aaKnown RBP12.57□□□□□ -0.4
PSEN1-217ENST00000556533 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
PSEN1-217ENST00000556533 PSMB3P49720 205 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 MEOX2P50222 304 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 DEFB1P60022 68 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 B2MP61769 119 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 PRR20EP86478 221 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 PRR20CP86479 221 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 PRR20DP86480 221 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 PRR20BP86481 221 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 PRR20AP86496 221 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 OPCMLQ14982 345 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 Q6ZWC4 215 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
PSEN1-217ENST00000556533 ISLRO14498 428 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 SOCS3O14543 225 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
PSEN1-217ENST00000556533 TRPT1Q86TN4 253 aaKnown RBP12.56□□□□□ -0.4
PSEN1-217ENST00000556533 ZNF709Q8N972 641 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 OR1L4Q8NGR5 311 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 C17orf77Q96MU5 243 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 ATP5SQ99766 215 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 RNF24Q9Y225 148 aa12.56□□□□□ -0.4
PSEN1-217ENST00000556533 TRAV5A0A0B4J249 113 aa12.55□□□□□ -0.4
PSEN1-217ENST00000556533 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
PSEN1-217ENST00000556533 SAMD13Q5VXD3 122 aa12.55□□□□□ -0.4
PSEN1-217ENST00000556533 MORN5Q5VZ52 161 aa12.55□□□□□ -0.4
PSEN1-217ENST00000556533 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
PSEN1-217ENST00000556533 PFDN5Q99471 154 aa12.55□□□□□ -0.4
PSEN1-217ENST00000556533 IFNA5P01569 189 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 GIPP09681 153 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-217ENST00000556533 LYL1P12980 280 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 Q5BKY6 102 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 CHAC2Q8WUX2 184 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 RNF183Q96D59 192 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 WDR61Q9GZS3 305 aaKnown RBP12.54□□□□□ -0.4
PSEN1-217ENST00000556533 TENM3Q9P273 2699 aa12.54□□□□□ -0.4
PSEN1-217ENST00000556533 H3BMM0 161 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 H3BTX0 84 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 EBLN2Q6P2I7 272 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 RNF182Q8N6D2 247 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 WFDC1Q9HC57 220 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 RPRMQ9NS64 109 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
PSEN1-217ENST00000556533 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.41
PSEN1-217ENST00000556533 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.41
PSEN1-217ENST00000556533 F6UB75 175 aa12.52□□□□□ -0.41
PSEN1-217ENST00000556533 SPP1P10451 314 aa12.52□□□□□ -0.41
PSEN1-217ENST00000556533 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.41
PSEN1-217ENST00000556533 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.41
PSEN1-217ENST00000556533 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.41
PSEN1-217ENST00000556533 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 OR2T35Q8NGX2 323 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 GATAD1Q8WUU5 269 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 ASB13Q8WXK3 278 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-217ENST00000556533 KCNIP2Q9NS61 270 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 CLEC5AQ9NY25 188 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 STAB2Q8WWQ8 2551 aa12.51□□□□□ -0.41
PSEN1-217ENST00000556533 FXYD6-FXYD2A0A087WZ82 144 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 A0A087X0K7 114 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
PSEN1-217ENST00000556533 PRB4P10163 310 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-217ENST00000556533 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 C4BPBP20851 252 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 HLA-DMBP28068 263 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 FXYD7P58549 80 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 NUTF2P61970 127 aaKnown RBP12.5□□□□□ -0.41
PSEN1-217ENST00000556533 FAM78BQ5VT40 261 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
PSEN1-217ENST00000556533 RARRES2Q99969 163 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms