RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GPR6P46095 362 aaPredicted RBP3.95□□□□□ -1.78
SRP54-211ENST00000556445 UBE2E1P51965 193 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 EFNA4P52798 201 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 ERHP84090 104 aaKnown RBP3.95□□□□□ -1.78
SRP54-211ENST00000556445 PRCDQ00LT1 54 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 DEFA5Q01523 94 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 RPL18AQ02543 176 aaKnown RBP3.95□□□□□ -1.78
SRP54-211ENST00000556445 ECSCRQ19T08 205 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 HLA-DRB5Q30154 266 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 C10orf91Q5T1B1 145 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 FAM53AQ6NSI3 398 aaPredicted RBP3.95□□□□□ -1.78
SRP54-211ENST00000556445 LY6G5BQ8NDX9 201 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 TMEM167AQ8TBQ9 72 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 MBD3L1Q8WWY6 194 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 LEAP2Q969E1 77 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 OR4C12Q96R67 309 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 RARRES2Q99969 163 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 RASL11BQ9BPW5 248 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 NABP2Q9BQ15 211 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 COMMD5Q9GZQ3 224 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 EIF5A2Q9GZV4 153 aaKnown RBP3.95□□□□□ -1.78
SRP54-211ENST00000556445 NPVFQ9HCQ7 196 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 SLC39A9Q9NUM3 307 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 MLXQ9UH92 298 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 SMPXQ9UHP9 88 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 OR51B2Q9Y5P1 312 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 ANKHD1Q8IWZ3 2542 aaKnown RBP3.95□□□□□ -1.78
SRP54-211ENST00000556445 PKDREJQ9NTG1 2253 aa3.95□□□□□ -1.78
SRP54-211ENST00000556445 ROS1P08922 2347 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 FRYLO94915 3013 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 IGHV2-26A0A0B4J1V2 119 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 CTXND1A0A1B0GTU2 59 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 UBE2L5PA0A1B0GUS4 154 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 RBFOX3A6NFN3 312 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 HSPB1P04792 205 aaKnown RBP3.94□□□□□ -1.78
SRP54-211ENST00000556445 RAB5AP20339 215 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 FGF7P21781 194 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 HTR1DP28221 377 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 C2orf83Q53S99 150 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 KHDC3LQ587J8 217 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 TPTE2P1Q5T6R2 138 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 OR10G4Q8NGN3 311 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 OR10G8Q8NGN5 311 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 SFT2D1Q8WV19 159 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 ARPC1AQ92747 370 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 C11orf52Q96A22 123 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 P2RX4Q99571 388 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 TXNDC17Q9BRA2 123 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 C19orf24Q9BVV8 132 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 MRPL20Q9BYC9 149 aaKnown RBP3.94□□□□□ -1.78
SRP54-211ENST00000556445 NKX6-2Q9C056 277 aaPredicted RBP3.94□□□□□ -1.78
SRP54-211ENST00000556445 SLC35B3Q9H1N7 401 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 SH3BGRL3Q9H299 93 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 ZNF256Q9Y2P7 627 aaPredicted RBP3.94□□□□□ -1.78
SRP54-211ENST00000556445 INSIG2Q9Y5U4 225 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 IGF2RP11717 2491 aa3.94□□□□□ -1.78
SRP54-211ENST00000556445 COL6A6A6NMZ7 2263 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 AKAP13Q12802 2813 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 TEX50A0A1B0GTY4 177 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 LYNX1G3V0Z9 82 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 BUB1B-PAK6H3BSN5 160 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 CORTO00230 105 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 AGPAT2O15120 278 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 FOXH1O75593 365 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 EIF3GO75821 320 aaKnown RBP eCLIP3.93□□□□□ -1.78
SRP54-211ENST00000556445 MT-CO2P00403 227 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 IGLV1-47P01700 117 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 TYMSP04818 313 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 SOD3P08294 240 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 OR5AL1P0C617 328 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 SFTA3P0C7M3 94 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 SAA1P0DJI8 122 aaPredicted RBP3.93□□□□□ -1.78
SRP54-211ENST00000556445 LYNX1P0DP58 116 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 HIST1H1EP10412 219 aaKnown RBP3.93□□□□□ -1.78
SRP54-211ENST00000556445 MDKP21741 143 aaPredicted RBP3.93□□□□□ -1.78
SRP54-211ENST00000556445 PRTN3P24158 256 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 GPX4P36969 197 aaPredicted RBP3.93□□□□□ -1.78
SRP54-211ENST00000556445 OPRK1P41145 380 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 MFAP2P55001 183 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 RUNX1Q01196 453 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 ZNF506Q5JVG8 444 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 AVPI1Q5T686 147 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 MINOS1Q5TGZ0 78 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 C11orf42Q8N5U0 333 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 ZNF491Q8N8L2 437 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.93□□□□□ -1.78
SRP54-211ENST00000556445 OR11H6Q8NGC7 330 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 PIFOQ8TCI5 191 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 TMEM208Q9BTX3 173 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 NPCDR1Q9BY65 106 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 MANBALQ9NQG1 85 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 RPRMQ9NS64 109 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 DPM3Q9P2X0 92 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 MINOS1-NBL1R4GNA1 71 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 CEP295Q9C0D2 2601 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 MALRD1Q5VYJ5 2156 aa3.93□□□□□ -1.78
SRP54-211ENST00000556445 SPTBN4Q9H254 2564 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms