RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ARL2-SNX15V9GYD0 113 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 ZFHX3Q15911 3703 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 TRBV24-1A0A075B6N3 115 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 A0A1B0GWB2 263 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 H3BS24 57 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 PROP1O75360 226 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 CST7O76096 145 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 LHBP01229 141 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 CSN3P07498 182 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 P0C879 139 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 PSMB3P49720 205 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 XGP55808 180 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 LINC00205P59089 165 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 BVES-AS1Q5T3Y7 98 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 SP5Q6BEB4 398 aaPredicted RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 GOLT1AQ6ZVE7 132 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF645Q8N7E2 425 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 OR5C1Q8NGR4 320 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 LSM10Q969L4 123 aaKnown RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 CISD1Q9NZ45 108 aaKnown RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 TRAPPC1Q9Y5R8 145 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 NBASA2RRP1 2371 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 A0A0G2JNJ9 132 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 DPRXA6NFQ7 191 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 H3BP45 60 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 K7N7A8 449 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 P01737 135 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 PPP1CCP36873 323 aaKnown RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 SLC25A34Q6PIV7 304 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 LINC00336Q6ZUF6 198 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM219Q86XT9 240 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 SLC25A33Q9BSK2 321 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 PLEKHF2Q9H8W4 249 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 SPANXCQ9NY87 97 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 CACNG5Q9UF02 275 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 Q9UFV3 132 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 C9orf118A6NHY6 69 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 LINC00473A8K010 186 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF253O75346 499 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 APOMO95445 188 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 DYNLT3P51808 116 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 KLRD1Q13241 179 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF506Q5JVG8 444 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 SPACA3Q8IXA5 215 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM256Q8N2U0 113 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 KIR3DL3Q8N743 410 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF502Q8TBZ5 544 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 GNPNAT1Q96EK6 184 aaPredicted RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 SSBP3Q9BWW4 388 aaPredicted RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 KCNIP2Q9NS61 270 aa4.13□□□□□ -1.75
TMEM260-210ENST00000556422 F11RQ9Y624 299 aaKnown RBP4.13□□□□□ -1.75
TMEM260-210ENST00000556422 IGHV3-43A0A0B4J1X8 118 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 IGHV3-43DP0DP04 118 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 SEC11AP67812 179 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 ARL16Q0P5N6 197 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 CR1LQ2VPA4 569 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 PRR30Q53SZ7 412 aaPredicted RBP4.12□□□□□ -1.75
TMEM260-210ENST00000556422 FAM201AQ5SY85 155 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 Q6ZWC4 215 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 FAM90A1Q86YD7 464 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 ZNRF1Q8ND25 227 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 C20orf78Q9BR46 151 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 GNG13Q9P2W3 67 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 TNCP24821 2201 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 IGHV3OR15-7A0A075B7D8 119 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 PFN1P07737 140 aaKnown RBP4.12□□□□□ -1.75
TMEM260-210ENST00000556422 SRIP30626 198 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 KIR2DS2P43631 304 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 LOXL3P58215 753 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 GNB2P62879 340 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 LINC01559Q495D7 138 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM86BQ8N661 226 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 ZNRF2Q8NHG8 242 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 RFESDQ8TAC1 157 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 Q8TCH9 128 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 ITLN1Q8WWA0 313 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 FAM236AA0A1B0GUQ0 79 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 FAM236BA0A1B0GV22 79 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 C17orf98A8MV24 154 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 GPX1P07203 203 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 C1orf229Q6ZS94 237 aaPredicted RBP4.12□□□□□ -1.75
TMEM260-210ENST00000556422 TCF23Q7RTU1 214 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 MANBALQ9NQG1 85 aa4.12□□□□□ -1.75
TMEM260-210ENST00000556422 ANKHD1Q8IWZ3 2542 aaKnown RBP4.12□□□□□ -1.75
TMEM260-210ENST00000556422 DEFB108AA8MXU0 73 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 SPRY3O43610 288 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 SYNGR2O43760 224 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 IGHV1-46P01743 117 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 CGB3P0DN86 165 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 CGB7P0DN87 165 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF134P52741 427 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 Q6AWC8 147 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 SPSB3Q6PJ21 355 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 FOXI2Q6ZQN5 318 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 SH2D6Q7Z4S9 175 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF114Q8NC26 417 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 PRORYQ9H606 182 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 TRAV5A0A0B4J249 113 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms