RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 LINC00588Q9Y4M8 146 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 TMEM56-RWDD3S4R434 201 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 PLAC8L1A1L4L8 177 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 INSP01308 110 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 FABP1P07148 127 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 TSPOP30536 169 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 OR2F1Q13607 317 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 SURF2Q15527 256 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-221ENST00000556342 FAAP20Q6NZ36 180 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 DTD1Q8TEA8 209 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 IL22RA2Q969J5 263 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 C16orf92Q96LL3 132 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 HSPB7Q9UBY9 170 aa7.48□□□□□ -1.21
SYNE2-221ENST00000556342 A0A087WXM4 84 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 GABARAPH6UMI1 98 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 M0R2Z0 102 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-221ENST00000556342 GABARAPO95166 117 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 ATP5G1P05496 136 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-221ENST00000556342 GALR1P47211 349 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 ATP5G3P48201 142 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
SYNE2-221ENST00000556342 ATP5IP56385 69 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-221ENST00000556342 B2MP61769 119 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 MZT2AQ6P582 158 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 BAP18Q8IXM2 172 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 OR11H7Q8NGC8 314 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 OR4C16Q8NGL9 310 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 C15orf40Q8WUR7 153 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 C17orf77Q96MU5 243 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 TRGV9Q99603 122 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 FUNDC2Q9BWH2 189 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 SLC25A32Q9H2D1 315 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 RBKSQ9H477 322 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 GPR132Q9UNW8 380 aa7.47□□□□□ -1.21
SYNE2-221ENST00000556342 CBY3A6NI87 242 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 DUSP14O95147 198 aaKnown RBP7.46□□□□□ -1.22
SYNE2-221ENST00000556342 AZU1P20160 251 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 CCR6P51684 374 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 CLINT1Q14677 625 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 SMCO1Q147U7 214 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 FCN2Q15485 313 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 SSX7Q7RTT5 188 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 GPR141Q7Z602 305 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 AP3S1Q92572 193 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 RSG1Q9BU20 258 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 SLC25A22Q9H936 323 aa7.46□□□□□ -1.22
SYNE2-221ENST00000556342 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-221ENST00000556342 IGKV1OR2-108A0A075B7D4 117 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 A0A0B4J2A0 478 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF98A6NK75 572 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 DISC1C4P0D8 188 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 SSBP1Q04837 148 aaKnown RBP7.45□□□□□ -1.22
SYNE2-221ENST00000556342 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 THAP8Q8NA92 274 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 Q9H8V8 135 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 SHPKQ9UHJ6 478 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 SLC45A2Q9UMX9 530 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 KCNIP3Q9Y2W7 256 aa7.45□□□□□ -1.22
SYNE2-221ENST00000556342 TRAV12-2A0A075B6T6 113 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 TRAV8-2A0A0B4J237 113 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 BOLA2-SMG1P6H3BVE0 249 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 CFDP00746 253 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF182P17025 639 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-221ENST00000556342 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
SYNE2-221ENST00000556342 MRPS10P82664 201 aaKnown RBP7.44□□□□□ -1.22
SYNE2-221ENST00000556342 IGFL4Q6B9Z1 124 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 LYZL2Q7Z4W2 148 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 OR1B1Q8NGR6 318 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 Q9H3A6 140 aa7.44□□□□□ -1.22
SYNE2-221ENST00000556342 AKAIN1P0CW23 69 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 TAS2R60P59551 318 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 GGNBP1Q5YKI7 109 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 TMEM256Q8N2U0 113 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 RNF182Q8N6D2 247 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 OR1S1Q8NH92 325 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 NUDT11Q96G61 164 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 C16orf74Q96GX8 76 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 GPR82Q96P67 336 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 LINC01587Q99440 93 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 PRRT1Q99946 306 aa7.43□□□□□ -1.22
SYNE2-221ENST00000556342 SLC25A39Q9BZJ4 359 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-221ENST00000556342 TIMM8BQ9Y5J9 83 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-221ENST00000556342 IAPPP10997 89 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 AKR1C4P17516 323 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 ORM2P19652 201 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 RAB11AP62491 216 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 SRPXP78539 464 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 FGL1Q08830 312 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF738Q8NE65 137 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 OR51S1Q8NGJ8 323 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 SMIM4Q8WVI0 70 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 GNPNAT1Q96EK6 184 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-221ENST00000556342 UHRF2Q96PU4 802 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms