RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 C11orf1Q9H5F2 150 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 TMEM231Q9H6L2 316 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 NRN1Q9NPD7 142 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 XCL2Q9UBD3 114 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 FBXL17Q9UF56 701 aa4.62□□□□□ -1.67
TMEM260-209ENST00000556079 STRAPQ9Y3F4 350 aaKnown RBP4.62□□□□□ -1.67
TMEM260-209ENST00000556079 LSM5Q9Y4Y9 91 aaKnown RBP4.62□□□□□ -1.67
TMEM260-209ENST00000556079 TRAV2A0A0B4J234 112 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 TRAV8-2A0A0B4J237 113 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 IGSF23A1L1A6 192 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 C7orf66A4D0T2 115 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 FAM24AA6NFZ4 105 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 H3BMM0 161 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 K7EPK0 472 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 UBE2CO00762 179 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 MED6O75586 246 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 DEDDO75618 318 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 CST7O76096 145 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 RAB11AP62491 216 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 TMEM14EPQ6UXP3 125 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 CYP2G1PQ6ZSU1 146 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 CSNK1G2-AS1Q8NCQ2 148 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 PPP1R14BQ96C90 147 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 NARS2Q96I59 477 aaKnown RBP4.61□□□□□ -1.67
TMEM260-209ENST00000556079 C7orf50Q9BRJ6 194 aaKnown RBP4.61□□□□□ -1.67
TMEM260-209ENST00000556079 RSG1Q9BU20 258 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 TP53TG1Q9Y2A0 90 aa4.61□□□□□ -1.67
TMEM260-209ENST00000556079 IGHV3OR16-12A0A075B7B8 117 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 C5orf51A6NDU8 294 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 ZNF98A6NK75 572 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 CENPXA8MT69 81 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 H3BRN7 92 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 SCGB2A1O75556 95 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 IFNA21P01568 189 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 LINC00869P0C866 280 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 S100A10P60903 97 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 ASAH1Q13510 395 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 CEMP1Q6PRD7 247 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 NOXA1Q86UR1 476 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 OR8I2Q8N0Y5 310 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 C12orf45Q8N5I9 185 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 RPP25LQ8N5L8 163 aaKnown RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 TMEM217Q8N7C4 229 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 CLRN3Q8NCR9 226 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 BPIFCQ8NFQ6 507 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 ZNF431Q8TF32 576 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 PHLDA1Q8WV24 401 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 DEDD2Q8WXF8 326 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 SMIM8Q96KF7 97 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 CIB3Q96Q77 187 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 MGST2Q99735 147 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 PARD6GQ9BYG4 376 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-209ENST00000556079 NDUFA13Q9P0J0 144 aa4.6□□□□□ -1.67
TMEM260-209ENST00000556079 HSPG2P98160 4391 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 TRAV5A0A0B4J249 113 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 FAM240BA0A1B0GVZ2 78 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 SNRPGP15A8MWD9 76 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 M0R2Z0 102 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 SLC17A3O00476 420 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 GOSR2O14653 212 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 EIF3GO75821 320 aaKnown RBP eCLIP4.59□□□□□ -1.67
TMEM260-209ENST00000556079 UPK1BO75841 260 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 OR5G3P0C626 314 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 HLA-DRB4P13762 266 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 BCAP31P51572 246 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 EMP1P54849 157 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 DLK1P80370 383 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 FGL1Q08830 312 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 IL15RAQ13261 267 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 RAB32Q13637 225 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 KIR3DS1Q14943 382 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 FAM78BQ5VT40 261 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 MIC13Q5XKP0 118 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 Q6ZTC4 211 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 TMEM144Q7Z5S9 345 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 NRARPQ7Z6K4 114 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 ZNF709Q8N972 641 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 OR4B1Q8NGF8 309 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 GATAD1Q8WUU5 269 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 SHANK2-AS3Q9BTD1 123 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 CCDC32Q9BV29 185 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 SLC25A39Q9BZJ4 359 aaPredicted RBP4.59□□□□□ -1.67
TMEM260-209ENST00000556079 ARL6Q9H0F7 186 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 C11orf68Q9H3H3 251 aaKnown RBP4.59□□□□□ -1.67
TMEM260-209ENST00000556079 SAV1Q9H4B6 383 aaPredicted RBP4.59□□□□□ -1.67
TMEM260-209ENST00000556079 RFNGQ9Y644 331 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 HLA-DRB4X5D2U9 266 aa4.59□□□□□ -1.67
TMEM260-209ENST00000556079 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 A0A0J9YX75 114 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 UBE2L5PA0A1B0GUS4 154 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 ZNF705FA8MVS1 300 aaPredicted RBP4.58□□□□□ -1.68
TMEM260-209ENST00000556079 ZNF705EA8MWA4 302 aaPredicted RBP4.58□□□□□ -1.68
TMEM260-209ENST00000556079 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 H0YIZ8 118 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 AGPAT2O15120 278 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 MRPS12O15235 138 aaKnown RBP4.58□□□□□ -1.68
TMEM260-209ENST00000556079 IL5P05113 134 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 CD5P06127 495 aa4.58□□□□□ -1.68
TMEM260-209ENST00000556079 CAV2P51636 162 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms