RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
CHMP4BP1-201ENST00000556017 SCP2D1Q9UJQ7 156 aa10.01□□□□□ -0.81
CHMP4BP1-201ENST00000556017 H3BRN7 92 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 RAB11AP62491 216 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 SRPXP78539 464 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 GGNBP1Q5YKI7 109 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 OR1B1Q8NGR6 318 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 RNF141Q8WVD5 230 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 TRIM63Q969Q1 353 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 TMEM208Q9BTX3 173 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 SLIRPQ9GZT3 109 aaKnown RBP10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 MCUBQ9NWR8 336 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 CCDC59Q9P031 241 aaKnown RBP10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 TMED3Q9Y3Q3 217 aa10□□□□□ -0.81
CHMP4BP1-201ENST00000556017 DUXBA0A1W2PPF3 345 aa9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 PMS2P5A8MQ11 134 aa9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 MRPS12O15235 138 aaKnown RBP9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 CFDP00746 253 aaPredicted RBP9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 INSP01308 110 aa9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 ORM2P19652 201 aa9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 TNFSF8P32971 234 aa9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 SCGB3A2Q96PL1 93 aa9.99□□□□□ -0.81
CHMP4BP1-201ENST00000556017 F5H768 121 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 BOLA2-SMG1P6H3BVE0 249 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 WRBO00258 174 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 SYNGR2O43760 224 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 DUSP14O95147 198 aaKnown RBP9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 NUDT3O95989 172 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 CXCL3P19876 107 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 KIR3DS1Q14943 382 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 TMEM128Q5BJH2 165 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 ACOT7LQ6ZUV0 252 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 Q8N1X5 172 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 BPIFCQ8NFQ6 507 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 GPR82Q96P67 336 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 RABL2AQ9UBK7 228 aaPredicted RBP9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 RABL2BQ9UNT1 228 aa9.98□□□□□ -0.81
CHMP4BP1-201ENST00000556017 CBY3A6NI87 242 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 H3BP45 60 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 ATP5G1P05496 136 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 ANXA3P12429 323 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 ATP5G3P48201 142 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 PLP1P60201 277 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 TMEM144Q7Z5S9 345 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 GPR141Q7Z602 305 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 OR8A1Q8NGG7 326 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 RNASE8Q8TDE3 154 aaKnown RBP9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 HERC1Q15751 4861 aa9.97□□□□□ -0.81
CHMP4BP1-201ENST00000556017 CCNKO75909 580 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 KRTAP10-2P60368 255 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 B2MP61769 119 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 PPP1R1AQ13522 171 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 PATE2Q6UY27 113 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TMED4Q7Z7H5 227 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 UHRF2Q96PU4 802 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TMEM147Q9BVK8 224 aa9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 MRPS26Q9BYN8 205 aaKnown RBP9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
CHMP4BP1-201ENST00000556017 A0A087X0K7 114 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 MED6O75586 246 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SFT2D2O95562 160 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TAS2R60P59551 318 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ID3Q02535 119 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 PSG3Q16557 428 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SPANXN5Q5MJ07 72 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 CYP2G1PQ6ZSU1 146 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SSX7Q7RTT5 188 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ZBTB8BQ8NAP8 495 aaPredicted RBP9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ZNF738Q8NE65 137 aa9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 CIB3Q96Q77 187 aaPredicted RBP9.95□□□□□ -0.82
CHMP4BP1-201ENST00000556017 FAT1Q14517 4588 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 FABP12A6NFH5 140 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 HOXB5P09067 269 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 HOXA5P20719 270 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 VAMP1P23763 118 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 CCL18P55774 89 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 HIST1H1AQ02539 215 aaPredicted RBP9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 AKR1C1Q04828 323 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 FGL1Q08830 312 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RAB2BQ8WUD1 216 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 LINC01587Q99440 93 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 V9GYH0 126 aa9.94□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ADAP1O75689 374 aa9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RPL7P18124 248 aaKnown RBP9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 POLR2GP62487 172 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TMEM256Q8N2U0 113 aa9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 PARD6GQ9BYG4 376 aaPredicted RBP9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 Q9H3A6 140 aa9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 Q9H8V8 135 aa9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 NOP10Q9NPE3 64 aaKnown RBP9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
CHMP4BP1-201ENST00000556017 VPS13BQ7Z7G8 4022 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms