RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 AKR1C1Q04828 323 aa11.94□□□□□ -0.5
XRCC3-215ENST00000555964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
XRCC3-215ENST00000555964 S100A7AQ86SG5 101 aa11.94□□□□□ -0.5
XRCC3-215ENST00000555964 CCDC59Q9P031 241 aaKnown RBP11.94□□□□□ -0.5
XRCC3-215ENST00000555964 IGKV1OR2-108A0A075B7D4 117 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 ZNF705GA8MUZ8 300 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-215ENST00000555964 BOLA2-SMG1P6H3BVE0 249 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 NUDT3O95989 172 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 ATP5G1P05496 136 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 RPL7P18124 248 aaKnown RBP11.93□□□□□ -0.5
XRCC3-215ENST00000555964 ORM2P19652 201 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 ATP5G3P48201 142 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 RNF24Q9Y225 148 aa11.93□□□□□ -0.5
XRCC3-215ENST00000555964 M0R2Z0 102 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 SMIM18P0DKX4 95 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 AP3S2P59780 193 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 RAP2BP61225 183 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 TNP2Q05952 138 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 LRTM2Q8N967 370 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 ZNF738Q8NE65 137 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
XRCC3-215ENST00000555964 CRXO43186 299 aaPredicted RBP11.91□□□□□ -0.5
XRCC3-215ENST00000555964 SYNGR2O43760 224 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 VAMP1P23763 118 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 TAS2R60P59551 318 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 FGL1Q08830 312 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 CLINT1Q14677 625 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 RAB2BQ8WUD1 216 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 C16orf74Q96GX8 76 aa11.91□□□□□ -0.5
XRCC3-215ENST00000555964 MRPS26Q9BYN8 205 aaKnown RBP11.91□□□□□ -0.5
XRCC3-215ENST00000555964 CBY3A6NI87 242 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 RHOBP62745 196 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 SPCS2Q15005 226 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 BAP18Q8IXM2 172 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 LINC01587Q99440 93 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 BCL7BQ9BQE9 202 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 HIGD1AQ9Y241 93 aa11.9□□□□□ -0.5
XRCC3-215ENST00000555964 STRAPQ9Y3F4 350 aaKnown RBP11.9□□□□□ -0.5
XRCC3-215ENST00000555964 PRSS46E5RG02 174 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 WRBO00258 174 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 TTC32Q5I0X7 151 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 SPANXN5Q5MJ07 72 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 MAPKAPK5-AS1Q8N8E1 139 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
XRCC3-215ENST00000555964 SLC25A39Q9BZJ4 359 aaPredicted RBP11.89□□□□□ -0.51
XRCC3-215ENST00000555964 TIMM8BQ9Y5J9 83 aaPredicted RBP11.89□□□□□ -0.51
XRCC3-215ENST00000555964 TRAV8-2A0A0B4J237 113 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 FABP12A6NFH5 140 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 H3BRN7 92 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 HYPMO75409 117 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 ADAP1O75689 374 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 IL5P05113 134 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 SELENOTP62341 195 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 HIST1H1AQ02539 215 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-215ENST00000555964 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 OR8A1Q8NGG7 326 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 LRRC20Q8TCA0 184 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 C17orf77Q96MU5 243 aa11.88□□□□□ -0.51
XRCC3-215ENST00000555964 SLC25A21Q9BQT8 299 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-215ENST00000555964 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 SMCO3A2RU48 225 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
XRCC3-215ENST00000555964 GATA2P23769 480 aaPredicted RBP11.87□□□□□ -0.51
XRCC3-215ENST00000555964 CYP2G1PQ6ZSU1 146 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 DYNC2LI1Q8TCX1 351 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 TMEM263Q8WUH6 116 aaKnown RBP11.87□□□□□ -0.51
XRCC3-215ENST00000555964 DEDD2Q8WXF8 326 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 LINC00588Q9Y4M8 146 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 HSPG2P98160 4391 aa11.87□□□□□ -0.51
XRCC3-215ENST00000555964 A0A087X0K7 114 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 CDKN1BP46527 198 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 TOMM5Q8N4H5 51 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
XRCC3-215ENST00000555964 H3BP45 60 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 H7BYZ3 331 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 SFT2D2O95562 160 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 PRM2P04554 102 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 LINC00869P0C866 280 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 HTN1P15515 57 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 CXCL2P19875 107 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 CXCL3P19876 107 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 AZU1P20160 251 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 TMBIM6P55061 237 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 PLP1P60201 277 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 PSG3Q16557 428 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 TMEM182Q6ZP80 229 aaPredicted RBP11.85□□□□□ -0.51
XRCC3-215ENST00000555964 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
XRCC3-215ENST00000555964 ABCA13Q86UQ4 5058 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms