RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 FGL1Q08830 312 aa13.6□□□□□ -0.23
FOXN3-211ENST00000555855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.6□□□□□ -0.23
FOXN3-211ENST00000555855 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
FOXN3-211ENST00000555855 TMEM147Q9BVK8 224 aa13.6□□□□□ -0.23
FOXN3-211ENST00000555855 MIXL1Q9H2W2 232 aa13.6□□□□□ -0.23
FOXN3-211ENST00000555855 PPP1R14DQ9NXH3 145 aa13.6□□□□□ -0.23
FOXN3-211ENST00000555855 IGKV1OR2-108A0A075B7D4 117 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 AZU1P20160 251 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 RHOBP62745 196 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 CTF1Q16619 201 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 SPATA12Q7Z6I5 190 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 NAA50Q9GZZ1 169 aaKnown RBP13.59□□□□□ -0.23
FOXN3-211ENST00000555855 Q9H8V8 135 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 RABL2AQ9UBK7 228 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-211ENST00000555855 RABL2BQ9UNT1 228 aa13.59□□□□□ -0.23
FOXN3-211ENST00000555855 CTDSP2O14595 271 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 MED6O75586 246 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 IAPPP10997 89 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 IL18Q14116 193 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 SSX7Q7RTT5 188 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 BAP18Q8IXM2 172 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 TMEM256Q8N2U0 113 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 ZNF738Q8NE65 137 aa13.58□□□□□ -0.24
FOXN3-211ENST00000555855 TRAV12-2A0A075B6T6 113 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 CTDSPLO15194 276 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 HTN1P15515 57 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 RNF141Q8WVD5 230 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 C17orf77Q96MU5 243 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
FOXN3-211ENST00000555855 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
FOXN3-211ENST00000555855 TIMM8BQ9Y5J9 83 aaPredicted RBP13.57□□□□□ -0.24
FOXN3-211ENST00000555855 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
FOXN3-211ENST00000555855 GATA2P23769 480 aaPredicted RBP13.56□□□□□ -0.24
FOXN3-211ENST00000555855 TAS2R60P59551 318 aa13.56□□□□□ -0.24
FOXN3-211ENST00000555855 TTC32Q5I0X7 151 aa13.56□□□□□ -0.24
FOXN3-211ENST00000555855 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
FOXN3-211ENST00000555855 SLC25A39Q9BZJ4 359 aaPredicted RBP13.56□□□□□ -0.24
FOXN3-211ENST00000555855 TRAV8-2A0A0B4J237 113 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 ANKRD20A5PA0PJZ0 165 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 PLAC8L1A1L4L8 177 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 PITX3O75364 302 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 TMEM144Q7Z5S9 345 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 C16orf74Q96GX8 76 aa13.55□□□□□ -0.24
FOXN3-211ENST00000555855 RAP2BP61225 183 aa13.54□□□□□ -0.24
FOXN3-211ENST00000555855 HIST1H1AQ02539 215 aaPredicted RBP13.54□□□□□ -0.24
FOXN3-211ENST00000555855 AKR1C1Q04828 323 aa13.54□□□□□ -0.24
FOXN3-211ENST00000555855 OR5I1Q13606 314 aa13.54□□□□□ -0.24
FOXN3-211ENST00000555855 ZNF493Q6ZR52 646 aa13.54□□□□□ -0.24
FOXN3-211ENST00000555855 OR10J6PQ8NGY7 276 aa13.54□□□□□ -0.24
FOXN3-211ENST00000555855 LRRC20Q8TCA0 184 aa13.54□□□□□ -0.24
FOXN3-211ENST00000555855 GNPNAT1Q96EK6 184 aaPredicted RBP13.54□□□□□ -0.24
FOXN3-211ENST00000555855 DNAH5Q8TE73 4624 aa13.53□□□□□ -0.24
FOXN3-211ENST00000555855 WRBO00258 174 aa13.53□□□□□ -0.24
FOXN3-211ENST00000555855 RPL7P18124 248 aaKnown RBP13.53□□□□□ -0.24
FOXN3-211ENST00000555855 TMEM182Q6ZP80 229 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-211ENST00000555855 OR8A1Q8NGG7 326 aa13.53□□□□□ -0.24
FOXN3-211ENST00000555855 NOP10Q9NPE3 64 aaKnown RBP13.53□□□□□ -0.24
FOXN3-211ENST00000555855 SYNGR2O43760 224 aa13.52□□□□□ -0.25
FOXN3-211ENST00000555855 ADAP1O75689 374 aa13.52□□□□□ -0.25
FOXN3-211ENST00000555855 SLC25A6P12236 298 aa13.52□□□□□ -0.25
FOXN3-211ENST00000555855 S100A7AQ86SG5 101 aa13.52□□□□□ -0.25
FOXN3-211ENST00000555855 RSL24D1Q9UHA3 163 aaKnown RBP13.52□□□□□ -0.25
FOXN3-211ENST00000555855 IL5P05113 134 aa13.51□□□□□ -0.25
FOXN3-211ENST00000555855 PSG3Q16557 428 aa13.51□□□□□ -0.25
FOXN3-211ENST00000555855 SPANXN5Q5MJ07 72 aa13.51□□□□□ -0.25
FOXN3-211ENST00000555855 SHANK2-AS3Q9BTD1 123 aa13.51□□□□□ -0.25
FOXN3-211ENST00000555855 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
FOXN3-211ENST00000555855 H3BRN7 92 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 HYPMO75409 117 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
FOXN3-211ENST00000555855 CDKN1BP46527 198 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 TMEM128Q5BJH2 165 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 TMED4Q7Z7H5 227 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 CCDC28AQ8IWP9 274 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 RXFP4Q8TDU9 374 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 TMEM263Q8WUH6 116 aaKnown RBP13.5□□□□□ -0.25
FOXN3-211ENST00000555855 ZNF503Q96F45 646 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
FOXN3-211ENST00000555855 STRAPQ9Y3F4 350 aaKnown RBP13.5□□□□□ -0.25
FOXN3-211ENST00000555855 APOBP04114 4563 aaKnown RBP13.5□□□□□ -0.25
FOXN3-211ENST00000555855 TRAV26-1A0A087WT03 109 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 A0A1W2PPQ1 181 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 PRSS46E5RG02 174 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 H7BYZ3 331 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 OR5G3P0C626 314 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 CXCL3P19876 107 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 M6PRP20645 277 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 VAMP1P23763 118 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 CYP2G1PQ6ZSU1 146 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 Q9H3A6 140 aa13.49□□□□□ -0.25
FOXN3-211ENST00000555855 FAUP35544 74 aaKnown RBP13.48□□□□□ -0.25
FOXN3-211ENST00000555855 KRTAP10-2P60368 255 aa13.48□□□□□ -0.25
FOXN3-211ENST00000555855 DLK1P80370 383 aa13.48□□□□□ -0.25
FOXN3-211ENST00000555855 RNF24Q9Y225 148 aa13.48□□□□□ -0.25
FOXN3-211ENST00000555855 A0A0J9YY99 117 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms