RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 C1QTNF4Q9BXJ3 329 aa16.89■□□□□ 0.29
CDKN3-208ENST00000555837 DOK5Q9P104 306 aa16.89■□□□□ 0.29
CDKN3-208ENST00000555837 UBE2L5PA0A1B0GUS4 154 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 RPL29P47914 159 aaKnown RBP16.88■□□□□ 0.29
CDKN3-208ENST00000555837 EWSR1Q01844 656 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDKN3-208ENST00000555837 FAM24BQ8N5W8 94 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 OR5C1Q8NGR4 320 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 RNF183Q96D59 192 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 MGST2Q99735 147 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 RSG1Q9BU20 258 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 DNAJC4Q9NNZ3 241 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 RPRMQ9NS64 109 aa16.88■□□□□ 0.29
CDKN3-208ENST00000555837 FGF7P21781 194 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 ACTL10Q5JWF8 245 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 C10orf113Q5VZT2 155 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 MUC7Q8TAX7 377 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 LINC00052Q96N35 136 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 SLC25A32Q9H2D1 315 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 OR5AC2Q9NZP5 309 aa16.87■□□□□ 0.29
CDKN3-208ENST00000555837 C17orf112F2Z3M2 114 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 DEFB135Q30KP9 77 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 EBLN2Q6P2I7 272 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 LINC00305Q7Z4B0 112 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 BPIFA4PQ86YQ2 179 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 LRRC20Q8TCA0 184 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 OVOL2Q9BRP0 275 aa16.86■□□□□ 0.29
CDKN3-208ENST00000555837 CA1P00915 261 aaPredicted RBP16.85■□□□□ 0.29
CDKN3-208ENST00000555837 B2MP61769 119 aa16.85■□□□□ 0.29
CDKN3-208ENST00000555837 NHLH2Q02577 135 aa16.85■□□□□ 0.29
CDKN3-208ENST00000555837 ZNF124Q15973 351 aa16.85■□□□□ 0.29
CDKN3-208ENST00000555837 FOXI2Q6ZQN5 318 aa16.85■□□□□ 0.29
CDKN3-208ENST00000555837 TRPT1Q86TN4 253 aaKnown RBP16.85■□□□□ 0.29
CDKN3-208ENST00000555837 SCRT1Q9BWW7 348 aa16.85■□□□□ 0.29
CDKN3-208ENST00000555837 LYL1P12980 280 aa16.84■□□□□ 0.29
CDKN3-208ENST00000555837 CXCL2P19875 107 aa16.84■□□□□ 0.29
CDKN3-208ENST00000555837 EDA2RQ9HAV5 297 aa16.84■□□□□ 0.29
CDKN3-208ENST00000555837 RETNQ9HD89 108 aa16.84■□□□□ 0.29
CDKN3-208ENST00000555837 SLC39A9Q9NUM3 307 aa16.84■□□□□ 0.29
CDKN3-208ENST00000555837 CLEC5AQ9NY25 188 aa16.84■□□□□ 0.29
CDKN3-208ENST00000555837 IFNA5P01569 189 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 RPL12P30050 165 aaKnown RBP16.83■□□□□ 0.28
CDKN3-208ENST00000555837 PRR20EP86478 221 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 PRR20CP86479 221 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 PRR20DP86480 221 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 PRR20BP86481 221 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 PRR20AP86496 221 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 OPCMLQ14982 345 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 CLUHP3Q96NS8 147 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 UHRF2Q96PU4 802 aa16.83■□□□□ 0.28
CDKN3-208ENST00000555837 A0A087X0K7 114 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 H0YIZ8 118 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 HLA-DRB4P13762 266 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 SCGB1C1Q8TD33 95 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 ATP5SQ99766 215 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 RNF126Q9BV68 326 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 NPCDR1Q9BY65 106 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 HSPB11Q9Y547 144 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 PXMP4Q9Y6I8 212 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 HLA-DRB4X5D2U9 266 aa16.82■□□□□ 0.28
CDKN3-208ENST00000555837 STAB2Q8WWQ8 2551 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 KNCNA6PVL3 124 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 SOCS3O14543 225 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 CLINT1Q14677 625 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 GUK1Q16774 197 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 MIC13Q5XKP0 118 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 LCN15Q6UWW0 184 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 RARRES2Q99969 163 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 SLC50A1Q9BRV3 221 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 SAV1Q9H4B6 383 aaPredicted RBP16.81■□□□□ 0.28
CDKN3-208ENST00000555837 MBD2Q9UBB5 411 aa16.81■□□□□ 0.28
CDKN3-208ENST00000555837 H3BMM0 161 aa16.8■□□□□ 0.28
CDKN3-208ENST00000555837 PATE2Q6UY27 113 aa16.8■□□□□ 0.28
CDKN3-208ENST00000555837 DUSP14O95147 198 aaKnown RBP16.79■□□□□ 0.28
CDKN3-208ENST00000555837 GIPP09681 153 aaPredicted RBP16.79■□□□□ 0.28
CDKN3-208ENST00000555837 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.79■□□□□ 0.28
CDKN3-208ENST00000555837 TMEM37Q8WXS4 190 aa16.79■□□□□ 0.28
CDKN3-208ENST00000555837 WDR61Q9GZS3 305 aaKnown RBP16.79■□□□□ 0.28
CDKN3-208ENST00000555837 NBEAL2Q6ZNJ1 2754 aa16.78■□□□□ 0.28
CDKN3-208ENST00000555837 CXCL3P19876 107 aa16.78■□□□□ 0.28
CDKN3-208ENST00000555837 OXA1LQ15070 435 aa16.78■□□□□ 0.28
CDKN3-208ENST00000555837 FCN2Q15485 313 aa16.78■□□□□ 0.28
CDKN3-208ENST00000555837 OR11H2Q8NH07 326 aa16.77■□□□□ 0.28
CDKN3-208ENST00000555837 ZNF266Q14584 549 aa16.76■□□□□ 0.27
CDKN3-208ENST00000555837 INO80EQ8NBZ0 244 aaPredicted RBP16.76■□□□□ 0.27
CDKN3-208ENST00000555837 PARD6GQ9BYG4 376 aaPredicted RBP16.76■□□□□ 0.27
CDKN3-208ENST00000555837 HRH4Q9H3N8 390 aa16.76■□□□□ 0.27
CDKN3-208ENST00000555837 TENM3Q9P273 2699 aa16.75■□□□□ 0.27
CDKN3-208ENST00000555837 AMBPP02760 352 aa16.75■□□□□ 0.27
CDKN3-208ENST00000555837 ZNF738Q8NE65 137 aa16.75■□□□□ 0.27
CDKN3-208ENST00000555837 OR11H7Q8NGC8 314 aa16.75■□□□□ 0.27
CDKN3-208ENST00000555837 OR4B1Q8NGF8 309 aa16.75■□□□□ 0.27
CDKN3-208ENST00000555837 MRPL32Q9BYC8 188 aaKnown RBP16.75■□□□□ 0.27
CDKN3-208ENST00000555837 A0A0J9YX75 114 aa16.74■□□□□ 0.27
CDKN3-208ENST00000555837 PSG9Q00887 426 aa16.74■□□□□ 0.27
CDKN3-208ENST00000555837 ZNF253O75346 499 aa16.73■□□□□ 0.27
CDKN3-208ENST00000555837 MIFP14174 115 aa16.73■□□□□ 0.27
CDKN3-208ENST00000555837 C11orf68Q9H3H3 251 aaKnown RBP16.73■□□□□ 0.27
CDKN3-208ENST00000555837 TMEM14CQ9P0S9 112 aa16.73■□□□□ 0.27
CDKN3-208ENST00000555837 HUWE1Q7Z6Z7 4374 aaKnown RBP16.72■□□□□ 0.27
CDKN3-208ENST00000555837 PSG3Q16557 428 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms