RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CST9LP1Q5W188 147 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 UNQ9165/PRO28630Q6UXU0 137 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 OR4F17Q8NGA8 305 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 C4orf3Q8WVX3 66 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 OR4F4Q96R69 305 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 VAX2Q9UIW0 290 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 TSSC4Q9Y5U2 329 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 IGHV3OR16-13A0A075B7E8 117 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 IGHV3-74A0A0B4J1X5 117 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 A0A1B0GUS0 222 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 LINC01619G3V211 115 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 CD5P06127 495 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 GP9P14770 177 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 TAGLN2P37802 199 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 DEFB136Q30KP8 78 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 GPHB5Q86YW7 130 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 OR8I2Q8N0Y5 310 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 OR11H1Q8NG94 326 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 OR1N2Q8NGR9 330 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 BLNKQ8WV28 456 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 WFDC12Q8WWY7 111 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 TMEM190Q8WZ59 177 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 FXYD5Q96DB9 178 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 CITED2Q99967 270 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 TMEM14CQ9P0S9 112 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 UFC1Q9Y3C8 167 aa7.4□□□□□ -1.22
HNRNPC-220ENST00000555585 FN1P02751 2386 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 FAM74A7A6NL05 159 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 C11orf94C9JXX5 98 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 H3BTX0 84 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 APOHP02749 345 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 NBEAP1P0C6P0 100 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 HIST1H1EP10412 219 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 RPL7P18124 248 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 ZP3P21754 424 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 S100A1P23297 94 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 CRYBB3P26998 211 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 ATP5G3P48201 142 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 CEBPGP53567 150 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 SLURP1P55000 103 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 TM4SF20Q53R12 229 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 C8orf86Q6ZUL3 223 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 SUN5Q8TC36 379 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 GRAMD2BQ96HH9 432 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 DUX3Q96PT4 197 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 YTHDF2Q9Y5A9 579 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 MTORP42345 2549 aa7.39□□□□□ -1.23
HNRNPC-220ENST00000555585 NSD1Q96L73 2696 aaPredicted RBP7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 CUBNO60494 3623 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 F8P00451 2351 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 IGHV7-4-1A0A0J9YVY3 117 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 A0A1W2PS18 150 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 TMEM218A2RU14 115 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 ZNF785A8K8V0 405 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 C9JQL5 133 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 K7EMT4 169 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 BUB3O43684 328 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 SFTA3P0C7M3 94 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 SYNJ2BPP57105 145 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 FOXL1Q12952 345 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 NSUN5P1Q3KNT7 163 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 REC114Q7Z4M0 266 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 C1QL4Q86Z23 238 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 GPR82Q96P67 336 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 DAZ1Q9NQZ3 744 aaKnown RBP7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 U3KQE9 123 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 ARL2-SNX15V9GYD0 113 aa7.38□□□□□ -1.23
HNRNPC-220ENST00000555585 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 KRBOX1C9JBD0 128 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 F8W036 122 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 H3BQ15 152 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 LGALS9O00182 355 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 MRPS12O15235 138 aaKnown RBP7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 BMI1P35226 326 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 GALR1P47211 349 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 CD81P60033 236 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 RANP62826 216 aaKnown RBP7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 KLF5Q13887 457 aaPredicted RBP7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 C1orf194Q5T5A4 169 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 C16orf54Q6UWD8 224 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 LINC00052Q96N35 136 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 TXNDC17Q9BRA2 123 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 SMPXQ9UHP9 88 aa7.37□□□□□ -1.23
HNRNPC-220ENST00000555585 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
HNRNPC-220ENST00000555585 PGPA6NDG6 321 aa7.36□□□□□ -1.23
HNRNPC-220ENST00000555585 F6UZH7 168 aa7.36□□□□□ -1.23
HNRNPC-220ENST00000555585 CCL24O00175 119 aa7.36□□□□□ -1.23
HNRNPC-220ENST00000555585 PDE6DO43924 150 aa7.36□□□□□ -1.23
HNRNPC-220ENST00000555585 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms