RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DEFB4AO15263 64 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 OR5G3P0C626 314 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 ATF4P18848 351 aaPredicted RBP14.91□□□□□ -0.02
VTI1B-205ENST00000555543 ID1P41134 155 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 RAP2BP61225 183 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 TMEM41BQ5BJD5 291 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 TMEM217Q8N7C4 229 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 CSNK1G2-AS1Q8NCQ2 148 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 C20orf173Q96LM9 149 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 MGST2Q99735 147 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 ARL6Q9H0F7 186 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 C11orf68Q9H3H3 251 aaKnown RBP14.91□□□□□ -0.02
VTI1B-205ENST00000555543 LYRM2Q9NU23 88 aaPredicted RBP14.91□□□□□ -0.02
VTI1B-205ENST00000555543 CXorf65A6NEN9 183 aa14.9□□□□□ -0.02
VTI1B-205ENST00000555543 PRAF2O60831 178 aa14.9□□□□□ -0.02
VTI1B-205ENST00000555543 PVALBP20472 110 aaPredicted RBP14.9□□□□□ -0.02
VTI1B-205ENST00000555543 ZNF546Q86UE3 836 aa14.9□□□□□ -0.02
VTI1B-205ENST00000555543 Q8NAQ8 132 aa14.9□□□□□ -0.02
VTI1B-205ENST00000555543 GPR82Q96P67 336 aa14.9□□□□□ -0.02
VTI1B-205ENST00000555543 SAV1Q9H4B6 383 aaPredicted RBP14.9□□□□□ -0.02
VTI1B-205ENST00000555543 hCG_2014768A0A024R1R8 64 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 F6UB75 175 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 MEOX2P50222 304 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 FOXI2Q6ZQN5 318 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 TMEM252Q8N6L7 170 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 C16orf92Q96LL3 132 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 X6R8D5 127 aa14.89□□□□□ -0.03
VTI1B-205ENST00000555543 ZNF705EA8MWA4 302 aaPredicted RBP14.88□□□□□ -0.03
VTI1B-205ENST00000555543 IGKV3-20P01619 116 aa14.88□□□□□ -0.03
VTI1B-205ENST00000555543 S100A7P31151 101 aa14.88□□□□□ -0.03
VTI1B-205ENST00000555543 SULT1A1P50225 295 aa14.88□□□□□ -0.03
VTI1B-205ENST00000555543 IGFL4Q6B9Z1 124 aa14.88□□□□□ -0.03
VTI1B-205ENST00000555543 ARV1Q9H2C2 271 aa14.88□□□□□ -0.03
VTI1B-205ENST00000555543 XCL2Q9UBD3 114 aa14.88□□□□□ -0.03
VTI1B-205ENST00000555543 TRAV8-2A0A0B4J237 113 aa14.87□□□□□ -0.03
VTI1B-205ENST00000555543 VWC2Q2TAL6 325 aa14.87□□□□□ -0.03
VTI1B-205ENST00000555543 SAMD13Q5VXD3 122 aa14.87□□□□□ -0.03
VTI1B-205ENST00000555543 UQCC1Q9NVA1 299 aa14.87□□□□□ -0.03
VTI1B-205ENST00000555543 WDR83OSQ9Y284 106 aa14.87□□□□□ -0.03
VTI1B-205ENST00000555543 IGHV4-28A0A0C4DH34 117 aa14.86□□□□□ -0.03
VTI1B-205ENST00000555543 UBE2L5PA0A1B0GUS4 154 aa14.86□□□□□ -0.03
VTI1B-205ENST00000555543 RBMY1A1P0DJD3 496 aaKnown RBP14.86□□□□□ -0.03
VTI1B-205ENST00000555543 RBMY1CP0DJD4 496 aa14.86□□□□□ -0.03
VTI1B-205ENST00000555543 CAMLGP49069 296 aa14.86□□□□□ -0.03
VTI1B-205ENST00000555543 NUTF2P61970 127 aaKnown RBP14.86□□□□□ -0.03
VTI1B-205ENST00000555543 RBMY1FQ15415 496 aaKnown RBP14.86□□□□□ -0.03
VTI1B-205ENST00000555543 STX12Q86Y82 276 aa14.86□□□□□ -0.03
VTI1B-205ENST00000555543 NMES1Q9C002 83 aa14.86□□□□□ -0.03
VTI1B-205ENST00000555543 A0A0J9YX75 114 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 H0YIZ8 118 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 MRPS12O15235 138 aaKnown RBP14.85□□□□□ -0.03
VTI1B-205ENST00000555543 RPL7P18124 248 aaKnown RBP14.85□□□□□ -0.03
VTI1B-205ENST00000555543 H2BFSP57053 126 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 FXYD7P58549 80 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 NANOS2P60321 138 aaKnown RBP14.85□□□□□ -0.03
VTI1B-205ENST00000555543 FGL1Q08830 312 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 LRRC37A5PQ49AS3 106 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 PXDC1Q5TGL8 231 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 MORN5Q5VZ52 161 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 MIC13Q5XKP0 118 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 RNF182Q8N6D2 247 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 ZNF709Q8N972 641 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 TMEM37Q8WXS4 190 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 RPRMQ9NS64 109 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 OR5AC2Q9NZP5 309 aa14.85□□□□□ -0.03
VTI1B-205ENST00000555543 NUPR2A6NF83 97 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 S100A11P31949 105 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 PRR20EP86478 221 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 PRR20CP86479 221 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 PRR20DP86480 221 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 PRR20BP86481 221 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 PRR20AP86496 221 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 FAM78BQ5VT40 261 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 CEMP1Q6PRD7 247 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-205ENST00000555543 LINC00305Q7Z4B0 112 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 OR4B1Q8NGF8 309 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 CLUHP3Q96NS8 147 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 C1QTNF4Q9BXJ3 329 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 SLC35B3Q9H1N7 401 aa14.84□□□□□ -0.03
VTI1B-205ENST00000555543 A0A087X0K7 114 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 COX7A2P2O60397 106 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 MIFP14174 115 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 HBG1P69891 147 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 HBG2P69892 147 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 SPATA31B1PQ5VZV4 182 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 EBLN2Q6P2I7 272 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 C11orf45Q8TAV5 145 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 ALG5Q9Y673 324 aa14.83□□□□□ -0.04
VTI1B-205ENST00000555543 HLA-DMBP28068 263 aa14.82□□□□□ -0.04
VTI1B-205ENST00000555543 NHLH2Q02577 135 aa14.82□□□□□ -0.04
VTI1B-205ENST00000555543 BAXQ07812 192 aa14.82□□□□□ -0.04
VTI1B-205ENST00000555543 RAB31Q13636 194 aa14.82□□□□□ -0.04
VTI1B-205ENST00000555543 S100A7AQ86SG5 101 aa14.82□□□□□ -0.04
VTI1B-205ENST00000555543 PHLDA1Q8WV24 401 aaPredicted RBP14.82□□□□□ -0.04
VTI1B-205ENST00000555543 ELOA3CA0A087WX78 387 aaPredicted RBP14.81□□□□□ -0.04
VTI1B-205ENST00000555543 A8MTW9 85 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 E5RGE8 158 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 SSNA1O43805 119 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 JTBO76095 146 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 SNRPCP09234 159 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms