RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 CRIP2P52943 208 aaPredicted RBP9.44□□□□□ -0.9
RIPK3-204ENST00000554756 FOXE3Q13461 319 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 C19orf54Q5BKX5 351 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 OR5T1Q8NG75 326 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 OR1L6Q8NGR2 347 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
RIPK3-204ENST00000554756 TRGV9Q99603 122 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 DNAJC4Q9NNZ3 241 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 TSSC4Q9Y5U2 329 aaPredicted RBP9.44□□□□□ -0.9
RIPK3-204ENST00000554756 E7EUB6 86 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 C18orf65Q6ZTR6 163 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 TMEM116Q8NCL8 245 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 ACY3Q96HD9 319 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 C12orf57Q99622 126 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 KLK15Q9H2R5 256 aa9.43□□□□□ -0.9
RIPK3-204ENST00000554756 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 COX7A2P2O60397 106 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BKO60814 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 TRGC2P03986 189 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BJP06899 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 ELANEP08246 267 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 CDX1P47902 265 aaPredicted RBP9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 S100A12P80511 92 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
RIPK3-204ENST00000554756 FAM110DQ8TAY7 271 aaPredicted RBP9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 SFRP2Q96HF1 295 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 MS4A10Q96PG2 267 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 FNDC4Q9H6D8 234 aaPredicted RBP9.42□□□□□ -0.9
RIPK3-204ENST00000554756 ZNF355PQ9NSJ1 428 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 F11RQ9Y624 299 aaKnown RBP9.42□□□□□ -0.9
RIPK3-204ENST00000554756 OR7C2O60412 319 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 IGLV1-40P01703 118 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 PSMB8P28062 276 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 C10orf113Q5VZT2 155 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 NPIPB3Q92617 1050 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
RIPK3-204ENST00000554756 IGKV1D-37A0A075B6S9 117 aa9.41□□□□□ -0.9
RIPK3-204ENST00000554756 PHOX2AO14813 284 aa9.41□□□□□ -0.9
RIPK3-204ENST00000554756 PLP1P60201 277 aa9.41□□□□□ -0.9
RIPK3-204ENST00000554756 TMEM37Q8WXS4 190 aa9.41□□□□□ -0.9
RIPK3-204ENST00000554756 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
RIPK3-204ENST00000554756 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 TEX22C9J3V5 150 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 FABP1P07148 127 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 OR10J4P0C629 311 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 RAB9AP51151 201 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 PRR31Q5SQ13 230 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 KLHL30-AS1Q8NEE0 82 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 FAM167A-AS1Q96KT0 104 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 DERL1Q9BUN8 251 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.9
RIPK3-204ENST00000554756 TRGC1P0CF51 173 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 NDUFA6P56556 154 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 TPPP2P59282 170 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 TAS2R60P59551 318 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 UBE2L3P68036 154 aaKnown RBP9.4□□□□□ -0.91
RIPK3-204ENST00000554756 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.91
RIPK3-204ENST00000554756 MLANAQ16655 118 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 OR4X1Q8NH49 305 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 FRZBQ92765 325 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 TMEM68Q96MH6 324 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 DUX3Q96PT4 197 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 GNB4Q9HAV0 340 aa9.4□□□□□ -0.91
RIPK3-204ENST00000554756 TENM1Q9UKZ4 2725 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 A0A1W2PPQ1 181 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 HELTA6NFD8 242 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 TRGV3P03979 118 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 REG1AP05451 166 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 GATA2P23769 480 aaPredicted RBP9.39□□□□□ -0.91
RIPK3-204ENST00000554756 S100A2P29034 98 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 GNG4P50150 75 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 COA6Q5JTJ3 125 aaKnown RBP9.39□□□□□ -0.91
RIPK3-204ENST00000554756 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 ZNF491Q8N8L2 437 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 OR4F17Q8NGA8 305 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
RIPK3-204ENST00000554756 TIGITQ495A1 244 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 NECAP1Q8NC96 275 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 OCC1Q8TAD7 63 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 MYOZ3Q8TDC0 251 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 GAR1Q9NY12 217 aaKnown RBP9.38□□□□□ -0.91
RIPK3-204ENST00000554756 TNCP24821 2201 aa9.38□□□□□ -0.91
RIPK3-204ENST00000554756 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms