RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.97■□□□□ 0.31
FOXA1-204ENST00000554607 C17orf77Q96MU5 243 aa16.97■□□□□ 0.31
FOXA1-204ENST00000554607 DUXBA0A1W2PPF3 345 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 ANKRD20A5PA0PJZ0 165 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 CBY3A6NI87 242 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 RPP30P78346 268 aaKnown RBP16.96■□□□□ 0.31
FOXA1-204ENST00000554607 BPIFCQ8NFQ6 507 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 TMEM147Q9BVK8 224 aa16.96■□□□□ 0.31
FOXA1-204ENST00000554607 PITX3O75364 302 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 MED6O75586 246 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 IAPPP10997 89 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 ORM2P19652 201 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 Q8N1X5 172 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 TMEM256Q8N2U0 113 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 LINC00588Q9Y4M8 146 aa16.95■□□□□ 0.3
FOXA1-204ENST00000554607 CLINT1Q14677 625 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 FCN2Q15485 313 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 DIRAS2Q96HU8 199 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 CIB3Q96Q77 187 aaPredicted RBP16.94■□□□□ 0.3
FOXA1-204ENST00000554607 LINC01587Q99440 93 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 MCUBQ9NWR8 336 aa16.94■□□□□ 0.3
FOXA1-204ENST00000554607 PLAC8L1A1L4L8 177 aa16.93■□□□□ 0.3
FOXA1-204ENST00000554607 AZU1P20160 251 aa16.93■□□□□ 0.3
FOXA1-204ENST00000554607 BAP18Q8IXM2 172 aa16.93■□□□□ 0.3
FOXA1-204ENST00000554607 TRAV8-2A0A0B4J237 113 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 BOLA2-SMG1P6H3BVE0 249 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 SLC25A6P12236 298 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 FGL1Q08830 312 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 IGFL4Q6B9Z1 124 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 ZNF738Q8NE65 137 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 RNF141Q8WVD5 230 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 PPP1R14DQ9NXH3 145 aa16.92■□□□□ 0.3
FOXA1-204ENST00000554607 TRAV12-2A0A075B6T6 113 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 TAS2R60P59551 318 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 SSX7Q7RTT5 188 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 SPATA12Q7Z6I5 190 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 RNF182Q8N6D2 247 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 C16orf74Q96GX8 76 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 Q9H8V8 135 aa16.91■□□□□ 0.3
FOXA1-204ENST00000554607 TIMM8BQ9Y5J9 83 aaPredicted RBP16.91■□□□□ 0.3
FOXA1-204ENST00000554607 APOBP04114 4563 aaKnown RBP16.91■□□□□ 0.3
FOXA1-204ENST00000554607 DNAH5Q8TE73 4624 aa16.9■□□□□ 0.3
FOXA1-204ENST00000554607 GATA2P23769 480 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-204ENST00000554607 RHOBP62745 196 aa16.9■□□□□ 0.3
FOXA1-204ENST00000554607 SLC25A39Q9BZJ4 359 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-204ENST00000554607 SCRT2Q9NQ03 307 aa16.9■□□□□ 0.3
FOXA1-204ENST00000554607 RSL24D1Q9UHA3 163 aaKnown RBP16.9■□□□□ 0.3
FOXA1-204ENST00000554607 PRSS46E5RG02 174 aa16.89■□□□□ 0.29
FOXA1-204ENST00000554607 AKR1C1Q04828 323 aa16.89■□□□□ 0.29
FOXA1-204ENST00000554607 TTC32Q5I0X7 151 aa16.89■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM182Q6ZP80 229 aaPredicted RBP16.89■□□□□ 0.29
FOXA1-204ENST00000554607 SYNGR2O43760 224 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 RPL7P18124 248 aaKnown RBP16.88■□□□□ 0.29
FOXA1-204ENST00000554607 HIST1H1AQ02539 215 aaPredicted RBP16.88■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM128Q5BJH2 165 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 ZNF493Q6ZR52 646 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM144Q7Z5S9 345 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 LRTM2Q8N967 370 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 OR8A1Q8NGG7 326 aa16.88■□□□□ 0.29
FOXA1-204ENST00000554607 H3BRN7 92 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 WRBO00258 174 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 HTN1P15515 57 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 RAP2BP61225 183 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 OR10J6PQ8NGY7 276 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 SHANK2-AS3Q9BTD1 123 aa16.87■□□□□ 0.29
FOXA1-204ENST00000554607 SPANXN5Q5MJ07 72 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 TMED4Q7Z7H5 227 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 S100A7AQ86SG5 101 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 HIGD1AQ9Y241 93 aa16.86■□□□□ 0.29
FOXA1-204ENST00000554607 HYPMO75409 117 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 IL5P05113 134 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 SMIM18P0DKX4 95 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 FAUP35544 74 aaKnown RBP16.85■□□□□ 0.29
FOXA1-204ENST00000554607 SPCS2Q15005 226 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 LRRC20Q8TCA0 184 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 GNPNAT1Q96EK6 184 aaPredicted RBP16.85■□□□□ 0.29
FOXA1-204ENST00000554607 ZNF503Q96F45 646 aa16.85■□□□□ 0.29
FOXA1-204ENST00000554607 NOP10Q9NPE3 64 aaKnown RBP16.85■□□□□ 0.29
FOXA1-204ENST00000554607 ADAP1O75689 374 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 CXCL3P19876 107 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 CDKN1BP46527 198 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 PSG3Q16557 428 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 CYP2G1PQ6ZSU1 146 aa16.84■□□□□ 0.29
FOXA1-204ENST00000554607 TMEM263Q8WUH6 116 aaKnown RBP16.84■□□□□ 0.29
FOXA1-204ENST00000554607 STRAPQ9Y3F4 350 aaKnown RBP16.84■□□□□ 0.29
FOXA1-204ENST00000554607 A0A087X0K7 114 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 A0A1W2PPQ1 181 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 BTF3P20290 206 aaKnown RBP16.83■□□□□ 0.28
FOXA1-204ENST00000554607 VAMP1P23763 118 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 OR5I1Q13606 314 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 ACOT7LQ6ZUV0 252 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 RNASE8Q8TDE3 154 aaKnown RBP16.83■□□□□ 0.28
FOXA1-204ENST00000554607 Q9H3A6 140 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 RNF24Q9Y225 148 aa16.83■□□□□ 0.28
FOXA1-204ENST00000554607 H7BYZ3 331 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 M6PRP20645 277 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 PLP1P60201 277 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 RXFP4Q8TDU9 374 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 C20orf144Q9BQM9 153 aa16.82■□□□□ 0.28
FOXA1-204ENST00000554607 UPK3BQ9BT76 320 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms