RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FOLR2P14207 255 aa9.53□□□□□ -0.88
SHMT2-214ENST00000554604 AREGP15514 252 aa9.53□□□□□ -0.88
SHMT2-214ENST00000554604 GCHFRP30047 84 aa9.53□□□□□ -0.88
SHMT2-214ENST00000554604 AKR1C3P42330 323 aa9.53□□□□□ -0.88
SHMT2-214ENST00000554604 ACY3Q96HD9 319 aa9.53□□□□□ -0.88
SHMT2-214ENST00000554604 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
SHMT2-214ENST00000554604 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
SHMT2-214ENST00000554604 TECRQ9NZ01 308 aaKnown RBP9.53□□□□□ -0.88
SHMT2-214ENST00000554604 IGKV1D-37A0A075B6S9 117 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 C11orf94C9JXX5 98 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 CLN5O75503 358 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 REG1AP05451 166 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 MFAP2P55001 183 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 TAS2R45P59539 299 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 TMEM241Q24JQ0 296 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 RNF212Q495C1 297 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 FAM78BQ5VT40 261 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 OR1L6Q8NGR2 347 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 OR1L4Q8NGR5 311 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 NPIPB3Q92617 1050 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 USMG5Q96IX5 58 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 YPEL4Q96NS1 127 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 PFDN5Q99471 154 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 TRGV9Q99603 122 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 ELOVL1Q9BW60 279 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 PARLQ9H300 379 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 TMEM167BQ9NRX6 74 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 PRELID1Q9Y255 219 aa9.52□□□□□ -0.89
SHMT2-214ENST00000554604 OR2C1O95371 312 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 BRI3O95415 125 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 RND2P52198 227 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 FLI1Q01543 452 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-214ENST00000554604 PQLC2Q6ZP29 291 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 MIR17HGQ75NE6 70 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 TMEM116Q8NCL8 245 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 HIST1H2BAQ96A08 127 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 CTDSP1Q9GZU7 261 aa9.51□□□□□ -0.89
SHMT2-214ENST00000554604 CTRB1P17538 263 aa9.5□□□□□ -0.89
SHMT2-214ENST00000554604 GATA2P23769 480 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-214ENST00000554604 ATP5G3P48201 142 aa9.5□□□□□ -0.89
SHMT2-214ENST00000554604 RHOGP84095 191 aa9.5□□□□□ -0.89
SHMT2-214ENST00000554604 CST9LP1Q5W188 147 aa9.5□□□□□ -0.89
SHMT2-214ENST00000554604 CTRB2Q6GPI1 263 aa9.5□□□□□ -0.89
SHMT2-214ENST00000554604 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
SHMT2-214ENST00000554604 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
SHMT2-214ENST00000554604 MRPL36Q9P0J6 103 aaKnown RBP9.5□□□□□ -0.89
SHMT2-214ENST00000554604 PEF1Q9UBV8 284 aaKnown RBP9.5□□□□□ -0.89
SHMT2-214ENST00000554604 FAM223BA6NKX1 122 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 C8orf88P0DMB2 117 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 NPPCP23582 126 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 UBE2G2P60604 165 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 RPL23P62829 140 aaKnown RBP9.49□□□□□ -0.89
SHMT2-214ENST00000554604 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 ZNF343Q6P1L6 599 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 FAM223AQ8IWN6 122 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 TMEM37Q8WXS4 190 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 C11orf52Q96A22 123 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 DOK5Q9P104 306 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 SMAD5-AS1Q9Y6J3 95 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
SHMT2-214ENST00000554604 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-214ENST00000554604 NPIPB5A8MRT5 1133 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 I3L2K1 104 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 NHLRC4P0CG21 123 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-214ENST00000554604 RAB5AP20339 215 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 SYNJ2BPP57105 145 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 PLP1P60201 277 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 ZNF674Q2M3X9 581 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 C10orf113Q5VZT2 155 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 TTC9CQ8N5M4 171 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 NECAP1Q8NC96 275 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 OR4X1Q8NH49 305 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 MLXQ9UH92 298 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
SHMT2-214ENST00000554604 DMRT1Q9Y5R6 373 aa9.48□□□□□ -0.89
SHMT2-214ENST00000554604 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 TRBV9A0A0B4J1U6 114 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 GP9P14770 177 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 ZNF90Q03938 601 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 KLF5Q13887 457 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-214ENST00000554604 ADIRFQ15847 76 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 FAM24BQ8N5W8 94 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 OR9G4Q8NGQ1 327 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
SHMT2-214ENST00000554604 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
SHMT2-214ENST00000554604 OR7C2O60412 319 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms