RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 NOL3O60936 208 aaKnown RBP15.73■□□□□ 0.11
GABRB3-206ENST00000554556 INSP01308 110 aa15.73■□□□□ 0.11
GABRB3-206ENST00000554556 CNN1P51911 297 aaKnown RBP15.73■□□□□ 0.11
GABRB3-206ENST00000554556 AKR1C1Q04828 323 aa15.73■□□□□ 0.11
GABRB3-206ENST00000554556 SPANXN5Q5MJ07 72 aa15.73■□□□□ 0.11
GABRB3-206ENST00000554556 TOMM5Q8N4H5 51 aa15.73■□□□□ 0.11
GABRB3-206ENST00000554556 OR11H7Q8NGC8 314 aa15.73■□□□□ 0.11
GABRB3-206ENST00000554556 SLC25A21Q9BQT8 299 aaPredicted RBP15.73■□□□□ 0.11
GABRB3-206ENST00000554556 SLIRPQ9GZT3 109 aaKnown RBP15.73■□□□□ 0.11
GABRB3-206ENST00000554556 ZNF705GA8MUZ8 300 aaPredicted RBP15.72■□□□□ 0.11
GABRB3-206ENST00000554556 PRSS46E5RG02 174 aa15.72■□□□□ 0.11
GABRB3-206ENST00000554556 GATA2P23769 480 aaPredicted RBP15.72■□□□□ 0.11
GABRB3-206ENST00000554556 FGL1Q08830 312 aa15.72■□□□□ 0.11
GABRB3-206ENST00000554556 SPINK13Q1W4C9 94 aa15.72■□□□□ 0.11
GABRB3-206ENST00000554556 STRAPQ9Y3F4 350 aaKnown RBP15.72■□□□□ 0.11
GABRB3-206ENST00000554556 DNAH2Q9P225 4427 aa15.71■□□□□ 0.11
GABRB3-206ENST00000554556 SFT2D2O95562 160 aa15.71■□□□□ 0.11
GABRB3-206ENST00000554556 TSPOP30536 169 aa15.71■□□□□ 0.11
GABRB3-206ENST00000554556 MCFD2Q8NI22 146 aa15.71■□□□□ 0.11
GABRB3-206ENST00000554556 C17orf77Q96MU5 243 aa15.71■□□□□ 0.11
GABRB3-206ENST00000554556 M0R2Z0 102 aa15.7■□□□□ 0.1
GABRB3-206ENST00000554556 HOXB5P09067 269 aa15.7■□□□□ 0.1
GABRB3-206ENST00000554556 RAP2BP61225 183 aa15.7■□□□□ 0.1
GABRB3-206ENST00000554556 PYDC2Q56P42 97 aa15.7■□□□□ 0.1
GABRB3-206ENST00000554556 TMEM182Q6ZP80 229 aaPredicted RBP15.7■□□□□ 0.1
GABRB3-206ENST00000554556 TMEM144Q7Z5S9 345 aa15.7■□□□□ 0.1
GABRB3-206ENST00000554556 CRXO43186 299 aaPredicted RBP15.69■□□□□ 0.1
GABRB3-206ENST00000554556 IL5P05113 134 aa15.69■□□□□ 0.1
GABRB3-206ENST00000554556 RPL7P18124 248 aaKnown RBP15.69■□□□□ 0.1
GABRB3-206ENST00000554556 IGFL4Q6B9Z1 124 aa15.69■□□□□ 0.1
GABRB3-206ENST00000554556 S100A7AQ86SG5 101 aa15.69■□□□□ 0.1
GABRB3-206ENST00000554556 ZNF738Q8NE65 137 aa15.69■□□□□ 0.1
GABRB3-206ENST00000554556 DEDD2Q8WXF8 326 aa15.69■□□□□ 0.1
GABRB3-206ENST00000554556 PKHD1P08F94 4074 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 TRAV8-2A0A0B4J237 113 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 H3BRN7 92 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 DEFB130BP0DP73 79 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 DEFB130AP0DP74 79 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 PPP1R1AQ13522 171 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 CYP2G1PQ6ZSU1 146 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 ACOT7LQ6ZUV0 252 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 ZNF575Q86XF7 245 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 RNF182Q8N6D2 247 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 TRIM63Q969Q1 353 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 SLC25A39Q9BZJ4 359 aaPredicted RBP15.68■□□□□ 0.1
GABRB3-206ENST00000554556 PPP1R14DQ9NXH3 145 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 HIGD1AQ9Y241 93 aa15.68■□□□□ 0.1
GABRB3-206ENST00000554556 SMCO3A2RU48 225 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 F5H768 121 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 H3BP45 60 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 BOLA2-SMG1P6H3BVE0 249 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 HYPMO75409 117 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 PRM2P04554 102 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 RHOBP62745 196 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 TMEM256Q8N2U0 113 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 SHANK2-AS3Q9BTD1 123 aa15.67■□□□□ 0.1
GABRB3-206ENST00000554556 ATP5G1P05496 136 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 ATP5G3P48201 142 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 SELENOTP62341 195 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 BAP18Q8IXM2 172 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 LRRC20Q8TCA0 184 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 LINC01587Q99440 93 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 RNF24Q9Y225 148 aa15.66■□□□□ 0.1
GABRB3-206ENST00000554556 H3BMQ9 156 aa15.65■□□□□ 0.1
GABRB3-206ENST00000554556 NUDT3O95989 172 aa15.65■□□□□ 0.1
GABRB3-206ENST00000554556 OR5G3P0C626 314 aa15.65■□□□□ 0.1
GABRB3-206ENST00000554556 CCL18P55774 89 aa15.65■□□□□ 0.1
GABRB3-206ENST00000554556 PSENENQ9NZ42 101 aa15.65■□□□□ 0.1
GABRB3-206ENST00000554556 TRAV12-2A0A075B6T6 113 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 CBY3A6NI87 242 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 AZU1P20160 251 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 TAS2R60P59551 318 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 PLP1P60201 277 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 UBE2MP61081 183 aaKnown RBP15.64■□□□□ 0.09
GABRB3-206ENST00000554556 ID3Q02535 119 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 HIST1H1AQ02539 215 aaPredicted RBP15.64■□□□□ 0.09
GABRB3-206ENST00000554556 OR8A1Q8NGG7 326 aa15.64■□□□□ 0.09
GABRB3-206ENST00000554556 NBDYA0A0U1RRE5 68 aa15.63■□□□□ 0.09
GABRB3-206ENST00000554556 LINC00869P0C866 280 aa15.63■□□□□ 0.09
GABRB3-206ENST00000554556 FCN2Q15485 313 aa15.63■□□□□ 0.09
GABRB3-206ENST00000554556 PSG3Q16557 428 aa15.63■□□□□ 0.09
GABRB3-206ENST00000554556 C16orf74Q96GX8 76 aa15.63■□□□□ 0.09
GABRB3-206ENST00000554556 A0A087X0K7 114 aa15.62■□□□□ 0.09
GABRB3-206ENST00000554556 PLAC8L1A1L4L8 177 aa15.62■□□□□ 0.09
GABRB3-206ENST00000554556 CXCL3P19876 107 aa15.62■□□□□ 0.09
GABRB3-206ENST00000554556 S100A5P33763 92 aa15.62■□□□□ 0.09
GABRB3-206ENST00000554556 POLR2GP62487 172 aaKnown RBP eCLIP15.62■□□□□ 0.09
GABRB3-206ENST00000554556 C6orf223Q8N319 242 aa15.62■□□□□ 0.09
GABRB3-206ENST00000554556 ZNRF2Q8NHG8 242 aa15.62■□□□□ 0.09
GABRB3-206ENST00000554556 TIMM8BQ9Y5J9 83 aaPredicted RBP15.62■□□□□ 0.09
GABRB3-206ENST00000554556 DYNC1H1Q14204 4646 aaKnown RBP15.62■□□□□ 0.09
GABRB3-206ENST00000554556 PKD1P98161 4303 aa15.61■□□□□ 0.09
GABRB3-206ENST00000554556 C16orf90A8MZG2 172 aa15.61■□□□□ 0.09
GABRB3-206ENST00000554556 HTN1P15515 57 aa15.61■□□□□ 0.09
GABRB3-206ENST00000554556 TNP2Q05952 138 aa15.61■□□□□ 0.09
GABRB3-206ENST00000554556 NPVFQ9HCQ7 196 aa15.61■□□□□ 0.09
GABRB3-206ENST00000554556 DNAH11Q96DT5 4516 aa15.6■□□□□ 0.09
GABRB3-206ENST00000554556 ANXA7P20073 488 aaKnown RBP15.6■□□□□ 0.09
GABRB3-206ENST00000554556 DLK1P80370 383 aa15.6■□□□□ 0.09
GABRB3-206ENST00000554556 CLINT1Q14677 625 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms