RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TSKUQ8WUA8 353 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 LRRC29Q8WV35 223 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 C22orf15Q8WYQ4 148 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 IGF2BP2-AS1Q96M15 143 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 SLC25A33Q9BSK2 321 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 SEPSECSQ9HD40 501 aaKnown RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 CALYQ9NYX4 217 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF492Q9P255 531 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 RNF24Q9Y225 148 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 AMMECR1Q9Y4X0 333 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-203ENST00000554264 OR51B2Q9Y5P1 312 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 DOCK11Q5JSL3 2073 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 MED12Q93074 2177 aa4.74□□□□□ -1.65
VPS33B-203ENST00000554264 MXRA5Q9NR99 2828 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 TANC2Q9HCD6 1990 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 KBTBD11-OT1A0A1B0GTJ5 212 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 A8MWL6 223 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 HSBP1L1C9JCN9 74 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 CORTO00230 105 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 BMPR1BO00238 502 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 NUPR1O60356 82 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 OR7C2O60412 319 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 HYPMO75409 117 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 CGAP01215 116 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 IGHV3-13P01766 116 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 CGB3P0DN86 165 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 CGB7P0DN87 165 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 TSPOP30536 169 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 SRIP30626 198 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF83P51522 516 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 UBE2G1P62253 170 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 UBE2L3P68036 154 aaKnown RBP4.73□□□□□ -1.65
VPS33B-203ENST00000554264 SSBP2P81877 361 aaPredicted RBP4.73□□□□□ -1.65
VPS33B-203ENST00000554264 PAX2Q02962 417 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 MEF2CQ06413 473 aaPredicted RBP4.73□□□□□ -1.65
VPS33B-203ENST00000554264 UBE2V1Q13404 147 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 GCSAMLQ5JQS6 135 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 SAPCD1Q5SSQ6 148 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 Q6AWC8 147 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 C12orf54Q6X4T0 127 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 S100A7AQ86SG5 101 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 C11orf42Q8N5U0 333 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 NHLRC2Q8NBF2 726 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 OR2Z1Q8NG97 314 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 OR10X1Q8NGY0 326 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 SSMEM1Q8WWF3 244 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 FMC1Q96HJ9 113 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 ATG101Q9BSB4 218 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 TMEM191AQ9H0A3 160 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 MS4A6AQ9H2W1 248 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 DNAJC4Q9NNZ3 241 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 IDI2-AS1Q9NZ38 188 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 PROCRQ9UNN8 238 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 DOCK7Q96N67 2140 aa4.73□□□□□ -1.65
VPS33B-203ENST00000554264 SONP18583 2426 aaKnown RBP4.73□□□□□ -1.65
VPS33B-203ENST00000554264 RAI1Q7Z5J4 1906 aaPredicted RBP4.72□□□□□ -1.65
VPS33B-203ENST00000554264 DSCAMO60469 2012 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 USF3Q68DE3 2245 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 TRAV30A0A087WSZ9 112 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 TRBV6-1A0A0K0K1D8 114 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 hADV38S2A0JD32 116 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 PGPEP1LA6NFU8 196 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 NKX6-3A6NJ46 265 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 H0YJW9 148 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 SLC17A3O00476 420 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 COX7A2P2O60397 106 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 LIPFP07098 398 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 CRYBB3P26998 211 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 GLRXP35754 106 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 CDKN1AP38936 164 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 HBBP68871 147 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 EDDM3AQ14507 147 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 LRRC10Q5BKY1 277 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 C10orf113Q5VZT2 155 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 MRPL54Q6P161 138 aaKnown RBP4.72□□□□□ -1.65
VPS33B-203ENST00000554264 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 PDPNQ86YL7 162 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 ABHD12Q8N2K0 398 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 CD177Q8N6Q3 437 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 Q8N976 141 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 THAP8Q8NA92 274 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 OR8B3Q8NGG8 313 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF596Q8TC21 504 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 C18orf32Q8TCD1 76 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 OR8B2Q96RD0 313 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 TMEM70Q9BUB7 260 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 ZNF430Q9H8G1 570 aaPredicted RBP4.72□□□□□ -1.65
VPS33B-203ENST00000554264 PLSCR4Q9NRQ2 329 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 TNFRSF19Q9NS68 423 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 HSPB8Q9UJY1 196 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 KLF12Q9Y4X4 402 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 FREM1Q5H8C1 2179 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 ZANQ9Y493 2812 aa4.72□□□□□ -1.65
VPS33B-203ENST00000554264 IGKV1D-17A0A075B6S4 117 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV3-43A0A0B4J1X8 118 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV2OR16-5A0A0B4J2B6 119 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 TCRBV4S1A1TA0A5B7 111 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms