RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 SLC25A39Q9BZJ4 359 aaPredicted RBP9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 CUBNO60494 3623 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 J3QKU1 62 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 RAB5AP20339 215 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 MFAP4P55083 255 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 RHOGP84095 191 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 C15orf32Q32M92 178 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 ZNF491Q8N8L2 437 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 OR1L6Q8NGR2 347 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 NOL4LQ96MY1 436 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 K7EN84 100 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 MT-ND4LP03901 98 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 IGHV4-31P0DP07 118 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 GP9P14770 177 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 FAM110DQ8TAY7 271 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 SONP18583 2426 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-206ENST00000553888 B4DEV8 164 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 PLP1P60201 277 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 SCGB2A2Q13296 93 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 DEFB112Q30KQ8 113 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 FLNAP21333 2647 aaKnown RBP9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 AKAP9Q99996 3911 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 GPR183P32249 361 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 ADMP35318 185 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 OR5I1Q13606 314 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 NHLRC2Q8NBF2 726 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 C11orf52Q96A22 123 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 RNF125Q96EQ8 232 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 C17orf77Q96MU5 243 aa9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 MRPL27Q9P0M9 148 aaKnown RBP9.94□□□□□ -0.82
VIPAS39-206ENST00000553888 A6NDX4 124 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 TOMM40O96008 361 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 IGHV4-59P01825 116 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 CTSGP08311 255 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 ZNF329Q86UD4 541 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 CIARTQ8N365 385 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 CLDN34H7C241 214 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 ZNF414Q96IQ9 312 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 PSMG3-AS1Q96PY0 264 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 TXNDC17Q9BRA2 123 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 BEX4Q9NWD9 120 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 LOXL1Q08397 574 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 CENPWQ5EE01 88 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 LCNL1Q6ZST4 164 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 ZNF586Q9NXT0 402 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 THYN1Q9P016 225 aa9.93□□□□□ -0.82
VIPAS39-206ENST00000553888 NBEAP1P0C6P0 100 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 CCDC140Q96MF4 163 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 TRAV41A0A0B4J266 112 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 WI2-2373I1.2A0A1W2PRP0 233 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 HELTA6NFD8 242 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 H7BYZ3 331 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 SNRPEP62304 92 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 WFDC11Q8NEX6 87 aa9.92□□□□□ -0.82
VIPAS39-206ENST00000553888 GATA3P23771 443 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 ZNF502Q8TBZ5 544 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 ACANP16112 2415 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 TRBV9A0A0B4J1U6 114 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 PGPA6NDG6 321 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 H3BRN7 92 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 Q71RC1 249 aaPredicted RBP9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 EXOC3-AS1Q8N2X6 119 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 GNB4Q9HAV0 340 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 ARL2-SNX15V9GYD0 113 aa9.91□□□□□ -0.82
VIPAS39-206ENST00000553888 SLC17A3O00476 420 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 GALR1P47211 349 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 FAM3BP58499 235 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 YPEL3P61236 119 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 C19orf54Q5BKX5 351 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 IL17RELQ6ZVW7 336 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 PPP5D1E7EU14 171 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 SAP30O75446 220 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 SLC25A5P05141 298 aaKnown RBP9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 FOLR2P14207 255 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 MYCNOSP40205 109 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 GNG4P50150 75 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 SFRP2Q96HF1 295 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 TMEM242Q9NWH2 141 aa9.9□□□□□ -0.82
VIPAS39-206ENST00000553888 A0A1B0GW15 77 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 PFN1P07737 140 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 RPL15P61313 204 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 C1QL4Q86Z23 238 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 ASCL2Q99929 193 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 CTDSP1Q9GZU7 261 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 CSTL1Q9H114 145 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 Q9H3A6 140 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 IGHV3OR16-13A0A075B7E8 117 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 TRAV30A0A087WSZ9 112 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 IGHV3-74A0A0B4J1X5 117 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 PEX7O00628 323 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 ISLRO14498 428 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms