RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SULT1A1P50225 295 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 PAX9P55771 341 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 ATP6V1FQ16864 119 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 LRRC37A5PQ49AS3 106 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 ZNF546Q86UE3 836 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 STHQ8IWL8 128 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 TMEM217Q8N7C4 229 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 GPR82Q96P67 336 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 NMES1Q9C002 83 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 WFDC10AQ9H1F0 79 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 NRN1Q9NPD7 142 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 LYRM2Q9NU23 88 aaPredicted RBP6.21□□□□□ -1.42
PSEN1-209ENST00000553855 UQCC1Q9NVA1 299 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 IGKV1D-37A0A075B6S9 117 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 F5H697 171 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 BUB3O43684 328 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 HYPMO75409 117 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 CST7O76096 145 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 SIX6O95475 246 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 OR5G3P0C626 314 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 LINC00869P0C866 280 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 MEOX2P50222 304 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 DEFB131AP59861 70 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 PXDC1Q5TGL8 231 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 Q6ZRG5 221 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 APRG1Q8IVJ8 170 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 ZNF414Q96IQ9 312 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 MED28Q9H204 178 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 SLC25A22Q9H936 323 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
PSEN1-209ENST00000553855 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 IGKV1OR2-108A0A075B7D4 117 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 KIR2DL5BA0A0G2JN68 375 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 KIR2DL5BA0A0G2JPC4 375 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 RBMY1BA6NDE4 496 aaKnown RBP6.19□□□□□ -1.42
PSEN1-209ENST00000553855 RBMY1EA6NEQ0 496 aaKnown RBP6.19□□□□□ -1.42
PSEN1-209ENST00000553855 PMS2P5A8MQ11 134 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 K7EQG2 157 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 TRIAP1O43715 76 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 COX7A2P2O60397 106 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 CCNKO75909 580 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 RBMY1DP0C7P1 496 aaKnown RBP6.19□□□□□ -1.42
PSEN1-209ENST00000553855 ZNF688P0C7X2 276 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 RPL35AP18077 110 aaKnown RBP6.19□□□□□ -1.42
PSEN1-209ENST00000553855 CAMLGP49069 296 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 NUTF2P61970 127 aaKnown RBP6.19□□□□□ -1.42
PSEN1-209ENST00000553855 BAXQ07812 192 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 RGS21Q2M5E4 152 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 PSMG4Q5JS54 123 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 CFAP161Q6P656 301 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 KIR2DL5AQ8N109 375 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 TMEM252Q8N6L7 170 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 LRRC20Q8TCA0 184 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 GLMPQ8WWB7 406 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 DOK5Q9P104 306 aa6.19□□□□□ -1.42
PSEN1-209ENST00000553855 UBE2L5PA0A1B0GUS4 154 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 ZNF98A6NK75 572 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 AGPAT2O15120 278 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 MPDU1O75352 247 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
PSEN1-209ENST00000553855 GATA2P23769 480 aaPredicted RBP6.18□□□□□ -1.42
PSEN1-209ENST00000553855 FGL1Q08830 312 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 LEMD1Q68G75 181 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
PSEN1-209ENST00000553855 ZNF709Q8N972 641 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 OR1L4Q8NGR5 311 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 IL17DQ8TAD2 202 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 THAP6Q8TBB0 222 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 PPP1R1CQ8WVI7 109 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 ARL6Q9H0F7 186 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 CSTL1Q9H114 145 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 KCNIP2Q9NS61 270 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 ALG5Q9Y673 324 aa6.18□□□□□ -1.42
PSEN1-209ENST00000553855 IGSF23A1L1A6 192 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 C17orf112F2Z3M2 114 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 IFNA5P01569 189 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 PSMB3P49720 205 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 PLP1P60201 277 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 ARL16Q0P5N6 197 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 IL15RAQ13261 267 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 TMEM41BQ5BJD5 291 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 ACTL10Q5JWF8 245 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 DGAT2L7PQ6IED9 249 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 EBLN2Q6P2I7 272 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 MORN3Q6PF18 240 aaPredicted RBP6.17□□□□□ -1.42
PSEN1-209ENST00000553855 Q6ZWC4 215 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 DCANP1Q8TF63 244 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 PFDN5Q99471 154 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 RSG1Q9BU20 258 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 SLC25A39Q9BZJ4 359 aaPredicted RBP6.17□□□□□ -1.42
PSEN1-209ENST00000553855 ARV1Q9H2C2 271 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
PSEN1-209ENST00000553855 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
PSEN1-209ENST00000553855 H3BRN7 92 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms