RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 BAXQ07812 192 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C15orf32Q32M92 178 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C10orf55Q5SWW7 151 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LIPKQ5VXJ0 399 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF57Q68EA5 555 aaPredicted RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C19orf35Q6ZS72 473 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MOB1BQ7L9L4 216 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NIT1Q86X76 327 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 HIST3H2BBQ8N257 126 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PHLDA1Q8WV24 401 aaPredicted RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SRSF12Q8WXF0 261 aaKnown RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ISOC2Q96AB3 205 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C18orf15Q96N68 181 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 DERL3Q96Q80 235 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM59Q9BXS4 323 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ACOT13Q9NPJ3 140 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TECRQ9NZ01 308 aaKnown RBP4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AK3Q9UIJ7 227 aa4.12□□□□□ -1.75
SMARCE1P3-201ENST00000553649 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 A0A0D9SG52 128 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KIR2DL5BA0A0G2JN68 375 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KIR2DL5BA0A0G2JPC4 375 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LOC100130705A0A1B0GUX0 176 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ANKRD20A5PA0PJZ0 165 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FAM223BA6NKX1 122 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF705EA8MWA4 302 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 XRCC3O43542 346 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR7C2O60412 319 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PAGE4O60829 102 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CRYGBP07316 175 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CBLN1P23435 193 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 APOC4P55056 127 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CLDN12P56749 244 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NANOS2P60321 138 aaKnown RBP4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 INSL4Q14641 139 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PRSS8Q16651 343 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RTL8BQ17RB0 113 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ANKRD55Q3KP44 614 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 VMA21Q3ZAQ7 101 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM69Q5SWH9 247 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM268Q5VZI3 342 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GGNBP1Q5YKI7 109 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 BTNL8Q6UX41 500 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CLEC19AQ6UXS0 136 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RBPMS2Q6ZRY4 209 aaKnown RBP4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FAM223AQ8IWN6 122 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KIR2DL5AQ8N109 375 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM217Q8N7C4 229 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR1L6Q8NGR2 347 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR2T35Q8NGX2 323 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C15orf40Q8WUR7 153 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PTH2Q96A98 100 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PINX1Q96BK5 328 aaKnown RBP4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GALNT14Q96FL9 552 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MRAP2Q96G30 205 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PGLYRP3Q96LB9 341 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SIGMAR1Q99720 223 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C20orf144Q9BQM9 153 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SRSF8Q9BRL6 282 aaKnown RBP4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MIEN1Q9BRT3 115 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RSG1Q9BU20 258 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR2D2Q9H210 308 aa4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FGF20Q9NP95 211 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1P3-201ENST00000553649 A0A0A6YYD4 124 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGHV3-35A0A0C4DH35 117 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGKV1-6A0A0C4DH72 117 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGSF23A1L1A6 192 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IFITM10A6NMD0 228 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SIVA1O15304 175 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SOCS1O15524 211 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SNAI2O43623 268 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 YIF1AO95070 293 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGLV2-14P01704 120 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AMBPP02760 352 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR13C7P0DN81 318 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GZMBP10144 247 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CD37P11049 281 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CELP19835 753 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SDC2P34741 201 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AKR1C2P52895 323 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NDUFA6P56556 154 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 UBE2KP61086 200 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 UNC119Q13432 240 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CLINT1Q14677 625 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF79Q15937 498 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MRGPRG-AS1Q2M3A8 158 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF585BQ52M93 769 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ACSM3Q53FZ2 586 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PYDC2Q56P42 97 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 KHDC3LQ587J8 217 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GLT8D1Q68CQ7 371 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF880Q6PDB4 577 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CEACAM19Q7Z692 300 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR11H7Q8NGC8 314 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PCNPQ8WW12 178 aaKnown RBP4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PTX4Q96A99 478 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 Q9N2K0 584 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms