RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GOSR2O14653 212 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 MBPP02686 304 aaPredicted RBP8.53□□□□□ -1.04
SRP54-203ENST00000553544 SPP1P10451 314 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 CAV2P51636 162 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 PAX9P55771 341 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 HBG1P69891 147 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 HBG2P69892 147 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 DLK1P80370 383 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 OR2F1Q13607 317 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 TMEM41BQ5BJD5 291 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 MORN3Q6PF18 240 aaPredicted RBP8.53□□□□□ -1.04
SRP54-203ENST00000553544 TMEM14EPQ6UXP3 125 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 ACOT7LQ6ZUV0 252 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 TMEM144Q7Z5S9 345 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 RCL1Q9Y2P8 373 aaKnown RBP8.53□□□□□ -1.04
SRP54-203ENST00000553544 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.04
SRP54-203ENST00000553544 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
SRP54-203ENST00000553544 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 MIFP14174 115 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 C4BPBP20851 252 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 LYZP61626 148 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 SELENOTP62341 195 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 RAB31Q13636 194 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 RBMY1FQ15415 496 aaKnown RBP8.52□□□□□ -1.05
SRP54-203ENST00000553544 RGS21Q2M5E4 152 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 LGALS9BQ3B8N2 356 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 PSMG4Q5JS54 123 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 SAMD13Q5VXD3 122 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 TMEM182Q6ZP80 229 aaPredicted RBP8.52□□□□□ -1.05
SRP54-203ENST00000553544 Q6ZTC4 211 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 Q8NAQ8 132 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 CSNK1G2-AS1Q8NCQ2 148 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 ASB13Q8WXK3 278 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 SLC25A31Q9H0C2 315 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 NPVFQ9HCQ7 196 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 LYRM2Q9NU23 88 aaPredicted RBP8.52□□□□□ -1.05
SRP54-203ENST00000553544 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
SRP54-203ENST00000553544 IGHV4-28A0A0C4DH34 117 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 C7orf66A4D0T2 115 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 ZNF705EA8MWA4 302 aaPredicted RBP8.51□□□□□ -1.05
SRP54-203ENST00000553544 E5RGE8 158 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 H3BMM0 161 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 SOCS3O14543 225 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 METTL15P1P0C7V9 234 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 SNRPD3P62318 126 aaKnown RBP8.51□□□□□ -1.05
SRP54-203ENST00000553544 TEPPQ6URK8 271 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 PPP1R14BQ96C90 147 aa8.51□□□□□ -1.05
SRP54-203ENST00000553544 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 GATA2P23769 480 aaPredicted RBP8.5□□□□□ -1.05
SRP54-203ENST00000553544 S100A11P31949 105 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 SULT1A1P50225 295 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 BAXQ07812 192 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 RAB32Q13637 225 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 ATP6V1FQ16864 119 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 SOHLH1Q5JUK2 328 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 PXDC1Q5TGL8 231 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 ZNF546Q86UE3 836 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 C17orf77Q96MU5 243 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 NDUFAF3Q9BU61 184 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 X6R8D5 127 aa8.5□□□□□ -1.05
SRP54-203ENST00000553544 PKD1P98161 4303 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 ZNF98A6NK75 572 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 CCNKO75909 580 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 RAP2BP61225 183 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 RRAS2P62070 204 aaPredicted RBP8.49□□□□□ -1.05
SRP54-203ENST00000553544 SLC38A11Q08AI6 406 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 OR8I2Q8N0Y5 310 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 GPR82Q96P67 336 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 TMEM147Q9BVK8 224 aa8.49□□□□□ -1.05
SRP54-203ENST00000553544 ELOA3CA0A087WX78 387 aaPredicted RBP8.48□□□□□ -1.05
SRP54-203ENST00000553544 MPDU1O75352 247 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 HLA-DRB4P13762 266 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 PSMB3P49720 205 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 PLP1P60201 277 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 IL15RAQ13261 267 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 GDF5OSQ5U4N7 250 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 CYP2G1PQ6ZSU1 146 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 ZNF575Q86XF7 245 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 PPP1R1CQ8WVI7 109 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 MED28Q9H204 178 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 SLC25A32Q9H2D1 315 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 KCNIP2Q9NS61 270 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 UQCC1Q9NVA1 299 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 CLEC5AQ9NY25 188 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 HLA-DRB4X5D2U9 266 aa8.48□□□□□ -1.05
SRP54-203ENST00000553544 ISLRO14498 428 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 AMBPP02760 352 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 ORM2P19652 201 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 ID1P41134 155 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 GALR1P47211 349 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 MEOX2P50222 304 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 DEFB1P60022 68 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 NUTF2P61970 127 aaKnown RBP8.47□□□□□ -1.05
SRP54-203ENST00000553544 FGL1Q08830 312 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 ARL16Q0P5N6 197 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms