RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 SMPXQ9UHP9 88 aa7.4□□□□□ -1.22
TMEM260-204ENST00000553335 A0A1W2PPV4 95 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 SEC14L6B5MCN3 397 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 UMAD1C9J7I0 102 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 H3BRN7 92 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 BUB3O43684 328 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 CD5P06127 495 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 TMEM41BQ5BJD5 291 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 PRR31Q5SQ13 230 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 C1orf194Q5T5A4 169 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 PHYHIPLQ96FC7 376 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 GPR82Q96P67 336 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 SHANK2-AS3Q9BTD1 123 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 VSIRQ9H7M9 311 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 TECRQ9NZ01 308 aaKnown RBP7.39□□□□□ -1.23
TMEM260-204ENST00000553335 RFNGQ9Y644 331 aa7.39□□□□□ -1.23
TMEM260-204ENST00000553335 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 IGHV3-49A0A0A0MS15 119 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 IGHV3-66A0A0C4DH42 116 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 HELTA6NFD8 242 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 ZNF98A6NK75 572 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 CHEK1O14757 476 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 APOHP02749 345 aaPredicted RBP7.38□□□□□ -1.23
TMEM260-204ENST00000553335 EDN2P20800 178 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 TAS2R45P59539 299 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 RAB2AP61019 212 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 GCSAMLQ5JQS6 135 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 FAM122CQ6P4D5 195 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 C16orf54Q6UWD8 224 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 IL34Q6ZMJ4 242 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 OR8I2Q8N0Y5 310 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 OR2K2Q8NGT1 345 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 TMED6Q8WW62 240 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 ACTR3CQ9C0K3 210 aaPredicted RBP7.38□□□□□ -1.23
TMEM260-204ENST00000553335 SLC25A22Q9H936 323 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 FUT9Q9Y231 359 aa7.38□□□□□ -1.23
TMEM260-204ENST00000553335 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
TMEM260-204ENST00000553335 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
TMEM260-204ENST00000553335 RAB5CP51148 216 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 DPPA3Q6W0C5 159 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
TMEM260-204ENST00000553335 TCF24Q7RTU0 167 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 BPIFA4PQ86YQ2 179 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 SCRT1Q9BWW7 348 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 SEPSECSQ9HD40 501 aaKnown RBP7.37□□□□□ -1.23
TMEM260-204ENST00000553335 RPRMQ9NS64 109 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 MLXQ9UH92 298 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 WNK1Q9H4A3 2382 aa7.37□□□□□ -1.23
TMEM260-204ENST00000553335 ANK2Q01484 3957 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 TRAV25A0A0B4J276 109 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 CTXND1A0A1B0GTU2 59 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 IGLV1-51P01701 117 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 IGLL1P15814 213 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 GALR1P47211 349 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 SULT1A2P50226 295 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 PAFAH1B2P68402 229 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 KIR3DS1Q14943 382 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 DEFB114Q30KQ6 69 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 KHDC3LQ587J8 217 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 LEMD1Q68G75 181 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 SIGLEC15Q6ZMC9 328 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 ADAMTSL5Q6ZMM2 481 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 RPP25LQ8N5L8 163 aaKnown RBP7.36□□□□□ -1.23
TMEM260-204ENST00000553335 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
TMEM260-204ENST00000553335 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 ZNF785A8K8V0 405 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 TEX46H3BTG2 121 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 OR7C2O60412 319 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 STAG3L2P0CL84 134 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 STAG3L3P0CL85 134 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 MEOX2P50222 304 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 MORN5Q5VZ52 161 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 LCN12Q6JVE5 192 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 ALKAL2Q6UX46 152 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 LRRC20Q8TCA0 184 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 RAB24Q969Q5 203 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 OR51M1Q9H341 326 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 TMEM14CQ9P0S9 112 aa7.35□□□□□ -1.23
TMEM260-204ENST00000553335 ZMAT5Q9UDW3 170 aaKnown RBP7.35□□□□□ -1.23
TMEM260-204ENST00000553335 DNASE2O00115 360 aaPredicted RBP7.34□□□□□ -1.23
TMEM260-204ENST00000553335 TSPAN4O14817 238 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 IFNA7P01567 189 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
TMEM260-204ENST00000553335 FAM90A2PQ658T7 463 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 PQLC2Q6ZP29 291 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 FAM213BQ8TBF2 198 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 PAXXQ9BUH6 204 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 SELENOKQ9Y6D0 94 aa7.34□□□□□ -1.23
TMEM260-204ENST00000553335 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 A0A087X0K7 114 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 MAP1LC3B2A6NCE7 125 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms