RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GPR132Q9UNW8 380 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 TIMM8BQ9Y5J9 83 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-209ENST00000553308 HERC1Q15751 4861 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 A0A1W2PPQ1 181 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 IAPPP10997 89 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 ZNF182P17025 639 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 GATA2P23769 480 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 XGP55808 180 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 LINC00315P59091 139 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 TAS2R60P59551 318 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 HIST1H1AQ02539 215 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 FGL1Q08830 312 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 ESRGQ1W209 222 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 Q5VSD8 79 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 MZT2AQ6P582 158 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 TMEM182Q6ZP80 229 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 TMEM256Q8N2U0 113 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 OR1B1Q8NGR6 318 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 RNASE8Q8TDE3 154 aaKnown RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 RXFP4Q8TDU9 374 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 VCX3AQ9NNX9 186 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 SLC45A2Q9UMX9 530 aa6.27□□□□□ -1.41
SYNE2-209ENST00000553308 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
SYNE2-209ENST00000553308 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-209ENST00000553308 A0A0B4J2A0 478 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 DISC1C4P0D8 188 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 ZNF701M0R085 212 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-209ENST00000553308 ORM2P19652 201 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 M6PRP20645 277 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 HOXA5P20719 270 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 ATP5IP56385 69 aaPredicted RBP6.26□□□□□ -1.41
SYNE2-209ENST00000553308 RHOBP62745 196 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 GGNBP1Q5YKI7 109 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 TMEM144Q7Z5S9 345 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 OR51S1Q8NGJ8 323 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 OR4D5Q8NGN0 318 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 OR1S1Q8NH92 325 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 TMEM263Q8WUH6 116 aaKnown RBP6.26□□□□□ -1.41
SYNE2-209ENST00000553308 GPR82Q96P67 336 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 TMEM147Q9BVK8 224 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 SHPKQ9UHJ6 478 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 DNAH5Q8TE73 4624 aa6.26□□□□□ -1.41
SYNE2-209ENST00000553308 A0A087WXM4 84 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 GAGE12BA1L429 117 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 H3BRN7 92 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 GAGE7O76087 117 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 CFDP00746 253 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-209ENST00000553308 GAGE12FP0CL80 117 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 GAGE12GP0CL81 117 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 GAGE12IP0CL82 117 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 AKAIN1P0CW23 69 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 RAB11AP62491 216 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 SSBP1Q04837 148 aaKnown RBP6.25□□□□□ -1.41
SYNE2-209ENST00000553308 KIR3DS1Q14943 382 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 ZNF493Q6ZR52 646 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 LINC00612Q8N6U2 182 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 BPIFCQ8NFQ6 507 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 OR8A1Q8NGG7 326 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 C15orf40Q8WUR7 153 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 AP3S1Q92572 193 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 ZNF503Q96F45 646 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 NAA50Q9GZZ1 169 aaKnown RBP6.25□□□□□ -1.41
SYNE2-209ENST00000553308 MIXL1Q9H2W2 232 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 PPP1R14DQ9NXH3 145 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 KCNIP3Q9Y2W7 256 aa6.25□□□□□ -1.41
SYNE2-209ENST00000553308 PITX3O75364 302 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 AKR1C4P17516 323 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 CXCL3P19876 107 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 CDKN1BP46527 198 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 CLVS1Q8IUQ0 354 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-209ENST00000553308 SMIM4Q8WVI0 70 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 FRZBQ92765 325 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 PRRT1Q99946 306 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 PARD6GQ9BYG4 376 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-209ENST00000553308 PTTG2Q9NZH5 202 aa6.24□□□□□ -1.41
SYNE2-209ENST00000553308 H7BYZ3 331 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 RLN2P04090 185 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 DNAH10OSP0CZ25 163 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 KRTAP10-1P60331 282 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 MRPS10P82664 201 aaKnown RBP6.23□□□□□ -1.41
SYNE2-209ENST00000553308 AKR1C1Q04828 323 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 PSG3Q16557 428 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 ACOT7LQ6ZUV0 252 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 TMPRSS5Q9H3S3 457 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
SYNE2-209ENST00000553308 A0A087X0K7 114 aa6.22□□□□□ -1.41
SYNE2-209ENST00000553308 A0A096LPF7 62 aa6.22□□□□□ -1.41
SYNE2-209ENST00000553308 H3BNG1 76 aa6.22□□□□□ -1.41
SYNE2-209ENST00000553308 WRBO00258 174 aa6.22□□□□□ -1.41
SYNE2-209ENST00000553308 RGS5O15539 181 aa6.22□□□□□ -1.41
SYNE2-209ENST00000553308 ADAP1O75689 374 aa6.22□□□□□ -1.41
SYNE2-209ENST00000553308 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-209ENST00000553308 RPL7P18124 248 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms