RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 DOK5Q9P104 306 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 L7N2F9 121 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 SULT1A1P50225 295 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 CAV2P51636 162 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 VAMP2P63027 116 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 PRR20EP86478 221 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 PRR20CP86479 221 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 PRR20DP86480 221 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 PRR20BP86481 221 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 PRR20AP86496 221 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 FOXI2Q6ZQN5 318 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 ZNF709Q8N972 641 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 CHAC2Q8WUX2 184 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 TMEM37Q8WXS4 190 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 GPR82Q96P67 336 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 RSG1Q9BU20 258 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 NMES1Q9C002 83 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 SLC25A22Q9H936 323 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 HIGD1AQ9Y241 93 aa13.98□□□□□ -0.17
PTCH1-227ENST00000553256 GALR1P47211 349 aa13.97□□□□□ -0.17
PTCH1-227ENST00000553256 PXDC1Q5TGL8 231 aa13.97□□□□□ -0.17
PTCH1-227ENST00000553256 ZNF546Q86UE3 836 aa13.97□□□□□ -0.17
PTCH1-227ENST00000553256 PPP1R14BQ96C90 147 aa13.97□□□□□ -0.17
PTCH1-227ENST00000553256 KMT2AQ03164 3969 aa13.97□□□□□ -0.17
PTCH1-227ENST00000553256 A0A087X0K7 114 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 GOSR2O14653 212 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 RBMY1A1P0DJD3 496 aaKnown RBP13.96□□□□□ -0.17
PTCH1-227ENST00000553256 RBMY1CP0DJD4 496 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 MEOX2P50222 304 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 S100A10P60903 97 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 RBMY1FQ15415 496 aaKnown RBP13.96□□□□□ -0.17
PTCH1-227ENST00000553256 SAMD13Q5VXD3 122 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 MORN5Q5VZ52 161 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 TMEM217Q8N7C4 229 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 ARL6Q9H0F7 186 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 ARV1Q9H2C2 271 aa13.96□□□□□ -0.17
PTCH1-227ENST00000553256 A0A0J9YX75 114 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 F6UB75 175 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 PVALBP20472 110 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-227ENST00000553256 ID1P41134 155 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 BCAP31P51572 246 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 AMTNQ6UX39 209 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 LINC00052Q96N35 136 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 CLEC5AQ9NY25 188 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 OR5AC2Q9NZP5 309 aa13.95□□□□□ -0.18
PTCH1-227ENST00000553256 EPPK1P58107 5090 aaKnown RBP13.94□□□□□ -0.18
PTCH1-227ENST00000553256 S100A11P31949 105 aa13.94□□□□□ -0.18
PTCH1-227ENST00000553256 DEFA1P59665 94 aa13.94□□□□□ -0.18
PTCH1-227ENST00000553256 DEFA3P59666 94 aa13.94□□□□□ -0.18
PTCH1-227ENST00000553256 RAP2BP61225 183 aa13.94□□□□□ -0.18
PTCH1-227ENST00000553256 ZNF705AQ6ZN79 300 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-227ENST00000553256 RNF126Q9BV68 326 aa13.94□□□□□ -0.18
PTCH1-227ENST00000553256 UQCC1Q9NVA1 299 aa13.94□□□□□ -0.18
PTCH1-227ENST00000553256 OR5G3P0C626 314 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 RPL7P18124 248 aaKnown RBP13.93□□□□□ -0.18
PTCH1-227ENST00000553256 CAMLGP49069 296 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 OPCMLQ14982 345 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 SPATA31B1PQ5VZV4 182 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 MIC13Q5XKP0 118 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 IGFL4Q6B9Z1 124 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 C16orf92Q96LL3 132 aa13.93□□□□□ -0.18
PTCH1-227ENST00000553256 IGHV4-28A0A0C4DH34 117 aa13.92□□□□□ -0.18
PTCH1-227ENST00000553256 DEFB4AO15263 64 aa13.92□□□□□ -0.18
PTCH1-227ENST00000553256 S100A7P31151 101 aa13.92□□□□□ -0.18
PTCH1-227ENST00000553256 RPL29P47914 159 aaKnown RBP13.92□□□□□ -0.18
PTCH1-227ENST00000553256 NHLH2Q02577 135 aa13.92□□□□□ -0.18
PTCH1-227ENST00000553256 LINC00305Q7Z4B0 112 aa13.92□□□□□ -0.18
PTCH1-227ENST00000553256 ELOA3CA0A087WX78 387 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-227ENST00000553256 ZNF705FA8MVS1 300 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-227ENST00000553256 ZNF705DP0CH99 300 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-227ENST00000553256 ZNF705BP0CI00 300 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-227ENST00000553256 MIFP14174 115 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 CXCL3P19876 107 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 ATP6V1FQ16864 119 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 FAM78BQ5VT40 261 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 CEMP1Q6PRD7 247 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-227ENST00000553256 PPP1R1CQ8WVI7 109 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 HRH4Q9H3N8 390 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 XCL2Q9UBD3 114 aa13.91□□□□□ -0.18
PTCH1-227ENST00000553256 DNAH6Q9C0G6 4158 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 E5RGE8 158 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 IGLC2P0DOY2 106 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 CYCSP99999 105 aaKnown RBP13.9□□□□□ -0.18
PTCH1-227ENST00000553256 STX12Q86Y82 276 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 NEU1Q99519 415 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 C1QTNF4Q9BXJ3 329 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 SLC35B3Q9H1N7 401 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 RPRMQ9NS64 109 aa13.9□□□□□ -0.18
PTCH1-227ENST00000553256 UBE2L5PA0A1B0GUS4 154 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 HLA-DMBP28068 263 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 NANOS2P60321 138 aaKnown RBP13.89□□□□□ -0.19
PTCH1-227ENST00000553256 NUTF2P61970 127 aaKnown RBP13.89□□□□□ -0.19
PTCH1-227ENST00000553256 HBG1P69891 147 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 HBG2P69892 147 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 PMS2P11Q13670 270 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 SAT2Q96F10 170 aaPredicted RBP13.89□□□□□ -0.19
PTCH1-227ENST00000553256 DNAJC4Q9NNZ3 241 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 SLC39A9Q9NUM3 307 aa13.89□□□□□ -0.19
PTCH1-227ENST00000553256 NUPR2A6NF83 97 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms