RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 U3KQK5 164 aa8.68□□□□□ -1.02
TRAFD1-209ENST00000552896 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 COX7A2P2O60397 106 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 ZNF688P0C7X2 276 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 RPL12P30050 165 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 RPL29P47914 159 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 APOC4P55056 127 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 DEFB131AP59861 70 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 SNRPD3P62318 126 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 FGL1Q08830 312 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 CLINT1Q14677 625 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 RCHY1Q96PM5 261 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 UHRF2Q96PU4 802 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 ATP5SQ99766 215 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 ARV1Q9H2C2 271 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 SLC25A22Q9H936 323 aa8.67□□□□□ -1.02
TRAFD1-209ENST00000552896 DNAH7Q8WXX0 4024 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 KIR2DL5BA0A0G2JN68 375 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 KIR2DL5BA0A0G2JPC4 375 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 SOCS3O14543 225 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 RPL7P18124 248 aaKnown RBP8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 PSMB3P49720 205 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 B2MP61769 119 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 ZNF124Q15973 351 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 MIC13Q5XKP0 118 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 LEMD1Q68G75 181 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 PATE2Q6UY27 113 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 Q6ZRG5 221 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 KIR2DL5AQ8N109 375 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 KIR2DL5BQ8NHK3 375 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 PFDN5Q99471 154 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
TRAFD1-209ENST00000552896 ISLRO14498 428 aa8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 PSMG4Q5JS54 123 aa8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 C10orf113Q5VZT2 155 aa8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 LINC00305Q7Z4B0 112 aa8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 OR1L4Q8NGR5 311 aa8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 PARD6GQ9BYG4 376 aaPredicted RBP8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.02
TRAFD1-209ENST00000552896 A0A087X0K7 114 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 UBE2CO00762 179 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 ATF4P18848 351 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 ID1P41134 155 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 STHQ8IWL8 128 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 TMEM37Q8WXS4 190 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 AQP10Q96PS8 301 aa8.64□□□□□ -1.03
TRAFD1-209ENST00000552896 C17orf112F2Z3M2 114 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 IFNA5P01569 189 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 CXCL2P19875 107 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 Q6ZWC4 215 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 ZNF709Q8N972 641 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 OR2T35Q8NGX2 323 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 GATAD1Q8WUU5 269 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 RSG1Q9BU20 258 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 SMIM3Q9BZL3 60 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 RETNQ9HD89 108 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 DNAJC4Q9NNZ3 241 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
TRAFD1-209ENST00000552896 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 SPP1P10451 314 aa8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 MORN5Q5VZ52 161 aa8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 BPIFA4PQ86YQ2 179 aa8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
TRAFD1-209ENST00000552896 FXYD6-FXYD2A0A087WZ82 144 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 G3V3Q6 166 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 ZNF266Q14584 549 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 TMEM41BQ5BJD5 291 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 Q5BKY6 102 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 ACTL10Q5JWF8 245 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 MORN3Q6PF18 240 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 LCN15Q6UWW0 184 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 SCGB1C1Q8TD33 95 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 CSTL1Q9H114 145 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 RPRMQ9NS64 109 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 TNFSF18Q9UNG2 199 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
TRAFD1-209ENST00000552896 RNF222A6NCQ9 220 aa8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 CA1P00915 261 aaPredicted RBP8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 IGLC2P0DOY2 106 aa8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 GCSAMLQ5JQS6 135 aa8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 INO80EQ8NBZ0 244 aaPredicted RBP8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 LINC00052Q96N35 136 aa8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 OVOL2Q9BRP0 275 aa8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 SLC50A1Q9BRV3 221 aa8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 MRPL32Q9BYC8 188 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 SAV1Q9H4B6 383 aaPredicted RBP8.6□□□□□ -1.03
TRAFD1-209ENST00000552896 WFDC1Q9HC57 220 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms