RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SRPXP78539 464 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 FCN2Q15485 313 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 LYZL2Q7Z4W2 148 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 BPIFCQ8NFQ6 507 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 C16orf74Q96GX8 76 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 SCGB3A2Q96PL1 93 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 LINC01587Q99440 93 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 PPP1R14DQ9NXH3 145 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 PAIP2BQ9ULR5 123 aaKnown RBP9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 TRAV12-2A0A075B6T6 113 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 IGKV1OR2-108A0A075B7D4 117 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 PLAC8L1A1L4L8 177 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 ORM2P19652 201 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 AZU1P20160 251 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 TAS2R60P59551 318 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 ZNF738Q8NE65 137 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 OR51S1Q8NGJ8 323 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 C17orf77Q96MU5 243 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 TMEM147Q9BVK8 224 aa9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 TIMM8BQ9Y5J9 83 aaPredicted RBP9.89□□□□□ -0.83
CHMP1A-210ENST00000551981 RGS5O15539 181 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 HTN1P15515 57 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 BTF3P20290 206 aaKnown RBP9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 RHOBP62745 196 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 RPP30P78346 268 aaKnown RBP9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 FGL1Q08830 312 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 TMEM144Q7Z5S9 345 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 Q9H3A6 140 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 SCP2D1Q9UJQ7 156 aa9.88□□□□□ -0.83
CHMP1A-210ENST00000551981 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 A0A1W2PPQ1 181 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 ADAP1O75689 374 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 IAPPP10997 89 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 OR5I1Q13606 314 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 IGFL4Q6B9Z1 124 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 ZNF493Q6ZR52 646 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 GNPNAT1Q96EK6 184 aaPredicted RBP9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
CHMP1A-210ENST00000551981 MED6O75586 246 aa9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 M6PRP20645 277 aa9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 CIB3Q96Q77 187 aaPredicted RBP9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 KRTAP1-5Q9BYS1 174 aa9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 MIXL1Q9H2W2 232 aa9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 NOP10Q9NPE3 64 aaKnown RBP9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 RABL2AQ9UBK7 228 aaPredicted RBP9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 RABL2BQ9UNT1 228 aa9.86□□□□□ -0.83
CHMP1A-210ENST00000551981 TRAV26-1A0A087WT03 109 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 DUXBA0A1W2PPF3 345 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 RPL7P18124 248 aaKnown RBP9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 GATA2P23769 480 aaPredicted RBP9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 AKR1C1Q04828 323 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 CTF1Q16619 201 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 OR8A1Q8NGG7 326 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 RXFP4Q8TDU9 374 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 UPK3BQ9BT76 320 aa9.85□□□□□ -0.83
CHMP1A-210ENST00000551981 CTDSPLO15194 276 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 PITX3O75364 302 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 RAP2BP61225 183 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 DLK1P80370 383 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 IL18Q14116 193 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 S100A7AQ86SG5 101 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 LRRC20Q8TCA0 184 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 RNASE8Q8TDE3 154 aaKnown RBP9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 UHRF2Q96PU4 802 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 MCUBQ9NWR8 336 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 PTTG2Q9NZH5 202 aa9.84□□□□□ -0.83
CHMP1A-210ENST00000551981 ANKRD20A5PA0PJZ0 165 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 H3BRN7 92 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 H7BYZ3 331 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 SLC25A6P12236 298 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 CDKN1BP46527 198 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 PSG3Q16557 428 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 SHANK2-AS3Q9BTD1 123 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 NAA50Q9GZZ1 169 aaKnown RBP9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 HIGD1AQ9Y241 93 aa9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 MRPS16Q9Y3D3 137 aaKnown RBP9.83□□□□□ -0.84
CHMP1A-210ENST00000551981 A0A0J9YY99 117 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 PRSS46E5RG02 174 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 H3BNG1 76 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 ZNF701M0R085 212 aaPredicted RBP9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 CTDSP2O14595 271 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 HYPMO75409 117 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 IL5P05113 134 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 INAFM2P0DMQ5 153 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 CXCL3P19876 107 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 ESRGQ1W209 222 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 TMEM182Q6ZP80 229 aaPredicted RBP9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 CCDC28AQ8IWP9 274 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 DIRAS2Q96HU8 199 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
CHMP1A-210ENST00000551981 ZNF586Q9NXT0 402 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms