RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 TMEM144Q7Z5S9 345 aa6.98□□□□□ -1.29
GCN1-208ENST00000551549 SMIM8Q96KF7 97 aa6.98□□□□□ -1.29
GCN1-208ENST00000551549 CLUHP3Q96NS8 147 aa6.98□□□□□ -1.29
GCN1-208ENST00000551549 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 TRAV8-2A0A0B4J237 113 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 PLA2G10O15496 165 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 SCGB1D2O95969 90 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 IL5P05113 134 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 METTL15P1P0C7V9 234 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 MEOX2P50222 304 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 IAH1Q2TAA2 248 aaPredicted RBP6.97□□□□□ -1.29
GCN1-208ENST00000551549 SPATA31B1PQ5VZV4 182 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 TMEM14EPQ6UXP3 125 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 RNF182Q8N6D2 247 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 NEU1Q99519 415 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 C7orf50Q9BRJ6 194 aaKnown RBP6.97□□□□□ -1.29
GCN1-208ENST00000551549 RNF126Q9BV68 326 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 SLC25A39Q9BZJ4 359 aaPredicted RBP6.97□□□□□ -1.29
GCN1-208ENST00000551549 RPRMQ9NS64 109 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 GSKIPQ9P0R6 139 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 RFNGQ9Y644 331 aa6.97□□□□□ -1.29
GCN1-208ENST00000551549 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 H3BRN7 92 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 HYPMO75409 117 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 LINC00869P0C866 280 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 SPART-AS1P0CW21 52 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 DLK1P80370 383 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 ARL16Q0P5N6 197 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 ZBTB8BQ8NAP8 495 aaPredicted RBP6.96□□□□□ -1.3
GCN1-208ENST00000551549 MITD1Q8WV92 249 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 SHANK2-AS3Q9BTD1 123 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 PLA2G2EQ9NZK7 142 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 HIGD1AQ9Y241 93 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 RCL1Q9Y2P8 373 aaKnown RBP6.96□□□□□ -1.3
GCN1-208ENST00000551549 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.3
GCN1-208ENST00000551549 TMEM189A5PLL7 270 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 A8MTW9 85 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 CCSO14618 274 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 MBPP02686 304 aaPredicted RBP6.95□□□□□ -1.3
GCN1-208ENST00000551549 AMBPP02760 352 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 PRM2P04554 102 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 PRB4P10163 310 aaPredicted RBP6.95□□□□□ -1.3
GCN1-208ENST00000551549 CNN1P51911 297 aaKnown RBP6.95□□□□□ -1.3
GCN1-208ENST00000551549 FGL1Q08830 312 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 SLC38A11Q08AI6 406 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 AMTNQ6UX39 209 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 PATE2Q6UY27 113 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 GPR82Q96P67 336 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 UHRF2Q96PU4 802 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 C20orf85Q9H1P6 137 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 GOLT1BQ9Y3E0 138 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 HSPG2P98160 4391 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
GCN1-208ENST00000551549 TRAV6A0A075B6T7 132 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 LOC102723971A0A1B0GUV8 181 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 C7orf66A4D0T2 115 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 FNDC10F2Z333 226 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 LYRM1O43325 122 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 TSC22D2O75157 780 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 OR5G3P0C626 314 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 S100A7P31151 101 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 TAS2R30P59541 319 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 PLP1P60201 277 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 RAP2BP61225 183 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 SELENOTP62341 195 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 CNPY1Q3B7I2 92 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 FAM222AQ5U5X8 452 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 OR11H7Q8NGC8 314 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 OR10P1Q8NGE3 313 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 ARL6Q9H0F7 186 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 NPVFQ9HCQ7 196 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 MGAT4CQ9UBM8 478 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 DKK2Q9UBU2 259 aa6.94□□□□□ -1.3
GCN1-208ENST00000551549 FAM25EA8MYX2 175 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 K7EPK0 472 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 M0R2Z0 102 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 CRXO43186 299 aaPredicted RBP6.93□□□□□ -1.3
GCN1-208ENST00000551549 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
GCN1-208ENST00000551549 HBE1P02100 147 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 TCRBP04435 133 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 RPL7P18124 248 aaKnown RBP6.93□□□□□ -1.3
GCN1-208ENST00000551549 SPINK13Q1W4C9 94 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 TEPPQ6URK8 271 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 ZNF738Q8NE65 137 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 SEC22CQ9BRL7 303 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 NIPSNAP3BQ9BS92 247 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 NDUFAF3Q9BU61 184 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 ARV1Q9H2C2 271 aa6.93□□□□□ -1.3
GCN1-208ENST00000551549 TRAV12-2A0A075B6T6 113 aa6.92□□□□□ -1.3
GCN1-208ENST00000551549 A0A087X0K7 114 aa6.92□□□□□ -1.3
GCN1-208ENST00000551549 ZNF705GA8MUZ8 300 aaPredicted RBP6.92□□□□□ -1.3
GCN1-208ENST00000551549 GOSR2O14653 212 aa6.92□□□□□ -1.3
GCN1-208ENST00000551549 AGPAT2O15120 278 aa6.92□□□□□ -1.3
GCN1-208ENST00000551549 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
GCN1-208ENST00000551549 SNRPCP09234 159 aaKnown RBP6.92□□□□□ -1.3
GCN1-208ENST00000551549 HTN3P15516 51 aa6.92□□□□□ -1.3
GCN1-208ENST00000551549 CXCL3P19876 107 aa6.92□□□□□ -1.3
GCN1-208ENST00000551549 RRN3P1Q2M238 152 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms