RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 RASL11BQ9BPW5 248 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
CACNB3-219ENST00000551544 A0A1B0GXF2 115 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 FAM90A27PA6NNH2 459 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 HINT1P49773 126 aaPredicted RBP10.36□□□□□ -0.75
CACNB3-219ENST00000551544 PLP1P60201 277 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 ABCA4P78363 2273 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 RBPJQ06330 500 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 CIARTQ8N365 385 aaPredicted RBP10.36□□□□□ -0.75
CACNB3-219ENST00000551544 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
CACNB3-219ENST00000551544 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 M0QZ24 198 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 OR2J3O76001 311 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 Q71RC1 249 aaPredicted RBP10.35□□□□□ -0.75
CACNB3-219ENST00000551544 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 PRSS22Q9GZN4 317 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 LY6HO94772 140 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 GRNP28799 593 aaKnown RBP10.35□□□□□ -0.75
CACNB3-219ENST00000551544 Q56UQ5 140 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 UNQ5815/PRO19632Q6UWF5 114 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 OR4F17Q8NGA8 305 aa10.35□□□□□ -0.75
CACNB3-219ENST00000551544 TLN1Q9Y490 2541 aaKnown RBP10.35□□□□□ -0.75
CACNB3-219ENST00000551544 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 I3L2K1 104 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 TIMM23O14925 209 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 CDKN1BP46527 198 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 FOXC1Q12948 553 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 EBLN2Q6P2I7 272 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 ASCL2Q99929 193 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 IGHV2-70DA0A0C4DH43 119 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
CACNB3-219ENST00000551544 COL8A1P27658 744 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 LDLRAD2Q5SZI1 272 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 OTORQ9NRC9 128 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 HILPDAQ9Y5L2 63 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 S4R3C0 116 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 MUC6Q6W4X9 2439 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 ZZEF1O43149 2961 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 IGKV1-17P01599 117 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 Q86TA4 180 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 CLEC5AQ9NY25 188 aa10.34□□□□□ -0.75
CACNB3-219ENST00000551544 SPTA1P02549 2419 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 C2orf70A6NJV1 201 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 ZNF672Q499Z4 452 aaPredicted RBP10.33□□□□□ -0.76
CACNB3-219ENST00000551544 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 C17orf77Q96MU5 243 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 TACC2O95359 2948 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 ARHGAP32A7KAX9 2087 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 IGLL1P15814 213 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 ARF6P62330 175 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 CFAP161Q6P656 301 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 RBPMS2Q6ZRY4 209 aaKnown RBP10.33□□□□□ -0.76
CACNB3-219ENST00000551544 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
CACNB3-219ENST00000551544 CEP295Q9C0D2 2601 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 A0A1W2PRD5 423 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 A0A1W2PRF3 423 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 A0A1W2PRM7 423 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 PAX2Q02962 417 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 FBLN7Q53RD9 439 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 CT83Q5H943 113 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 KLF17Q5JT82 389 aaPredicted RBP10.32□□□□□ -0.76
CACNB3-219ENST00000551544 LY6LH3BQJ8 138 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 CHEK1O14757 476 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 C1RLQ9NZP8 487 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
CACNB3-219ENST00000551544 K7EIM0 57 aa10.31□□□□□ -0.76
CACNB3-219ENST00000551544 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
CACNB3-219ENST00000551544 Q6ZVH6 145 aa10.31□□□□□ -0.76
CACNB3-219ENST00000551544 LIPFP07098 398 aa10.31□□□□□ -0.76
CACNB3-219ENST00000551544 FAM162BQ5T6X4 162 aa10.31□□□□□ -0.76
CACNB3-219ENST00000551544 ANKHD1Q8IWZ3 2542 aaKnown RBP10.31□□□□□ -0.76
CACNB3-219ENST00000551544 TRAV30A0A087WSZ9 112 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
CACNB3-219ENST00000551544 IL4P05112 153 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 HTR1DP28221 377 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 KLRD1Q13241 179 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 HES1Q14469 280 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 BPIFA4PQ86YQ2 179 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 SCNM1Q9BWG6 230 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 SOX21Q9Y651 276 aaPredicted RBP10.3□□□□□ -0.76
CACNB3-219ENST00000551544 RELNP78509 3460 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 NBASA2RRP1 2371 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 RNF5Q99942 180 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 SHANK2-AS3Q9BTD1 123 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 TMEM70Q9BUB7 260 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
CACNB3-219ENST00000551544 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
CACNB3-219ENST00000551544 K7ENP7 123 aa10.29□□□□□ -0.76
CACNB3-219ENST00000551544 NBR2O15453 112 aa10.29□□□□□ -0.76
CACNB3-219ENST00000551544 NBL1P41271 181 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms