RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 LINC00322Q6ZN03 302 aaPredicted RBP11.25□□□□□ -0.61
SMARCD1-211ENST00000551497 LINC00305Q7Z4B0 112 aa11.25□□□□□ -0.61
SMARCD1-211ENST00000551497 SCGB1C1Q8TD33 95 aa11.25□□□□□ -0.61
SMARCD1-211ENST00000551497 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
SMARCD1-211ENST00000551497 TNFSF18Q9UNG2 199 aa11.25□□□□□ -0.61
SMARCD1-211ENST00000551497 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 IFNA5P01569 189 aa11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 ZNF709Q8N972 641 aa11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 INO80EQ8NBZ0 244 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-211ENST00000551497 S100A7P31151 101 aa11.23□□□□□ -0.61
SMARCD1-211ENST00000551497 OR11H4Q8NGC9 324 aa11.23□□□□□ -0.61
SMARCD1-211ENST00000551497 ST6GAL2Q96JF0 529 aa11.23□□□□□ -0.61
SMARCD1-211ENST00000551497 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
SMARCD1-211ENST00000551497 AGRNO00468 2067 aa11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 ARPC5O15511 151 aa11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 SNRPCP09234 159 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 GALR1P47211 349 aa11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 HAGHQ16775 308 aa11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
SMARCD1-211ENST00000551497 A0A1B0GVG6 124 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 KNCNA6PVL3 124 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 C17orf112F2Z3M2 114 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 SOCS3O14543 225 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 PSMG4Q5JS54 123 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 S100A7AQ86SG5 101 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 LINC00052Q96N35 136 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 GPR82Q96P67 336 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 PFDN5Q99471 154 aa11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.61
SMARCD1-211ENST00000551497 PRKDCP78527 4128 aaKnown RBP11.21□□□□□ -0.62
SMARCD1-211ENST00000551497 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 DEFB1P60022 68 aa11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 FFAR4Q5NUL3 377 aa11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 MFFQ9GZY8 342 aa11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 SEPSECSQ9HD40 501 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-211ENST00000551497 H3BTX0 84 aa11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 RPL7L1Q6DKI1 246 aaKnown RBP11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 MIR17HGQ75NE6 70 aa11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 HSD17B11Q8NBQ5 300 aa11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 C16orf92Q96LL3 132 aa11.19□□□□□ -0.62
SMARCD1-211ENST00000551497 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 H3BQ15 152 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 ID1P41134 155 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 ZNF266Q14584 549 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 KCNIP2Q9NS61 270 aa11.18□□□□□ -0.62
SMARCD1-211ENST00000551497 A0A087X0K7 114 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 ISLRO14498 428 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 EIF3GO75821 320 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 CXCL2P19875 107 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 ATP6V0CP27449 155 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 HLA-DMBP28068 263 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 PSMB3P49720 205 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 MEOX2P50222 304 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 SH3BGRL3Q9H299 93 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 RETNQ9HD89 108 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 CYTL1Q9NRR1 136 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 RNF24Q9Y225 148 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 TIMM9Q9Y5J7 89 aa11.17□□□□□ -0.62
SMARCD1-211ENST00000551497 HMSDA8MTL9 139 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 CD300CQ08708 224 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 GDF5OSQ5U4N7 250 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 KCNRGQ8N5I3 272 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
SMARCD1-211ENST00000551497 BORCS7-ASMTA0A0B4J1R7 106 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 F6UB75 175 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 PYYP10082 97 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 RAB2AP61019 212 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 STHQ8IWL8 128 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 TCTE3Q8IZS6 198 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 FUT9Q9Y231 359 aa11.15□□□□□ -0.62
SMARCD1-211ENST00000551497 H3BMM0 161 aa11.14□□□□□ -0.63
SMARCD1-211ENST00000551497 SLC17A3O00476 420 aa11.14□□□□□ -0.63
SMARCD1-211ENST00000551497 TAAR5O14804 337 aa11.14□□□□□ -0.63
SMARCD1-211ENST00000551497 ACOT6Q3I5F7 207 aaPredicted RBP11.14□□□□□ -0.63
SMARCD1-211ENST00000551497 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms